Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1969 ATGTCTTCTTCGGAACCGAAAAGATGGATATACGACGTGTTCTTGAGCTTCCAAGGCGAAGACTCTCGCAGCACAACCGCCTCACATCTCTACAATTCTCTTACTCAAGCCGGCCTCTACGTTTTCCGCGACGATGAAGAGCTTCAGAAAGGAGACCAGATCTCGCCCTCACTGATTCGAGCAATAGAAGCTTCTAGAATCTCTCTGGTCATTCTGTCGGAACATTACGCTGCCTCAACATGGTGCCTGGAAGAGTTGGAGAAGATAATGGAGTGCCGGAGAAGCATAGGTCAGTGGGTTATTCCGGTGTTCTGTGATGCAAGTCCTTCAAAAATACGCCGTCAGGAAGGTCCTATCGGAGAAGCTTTCCGGCAGCATCTGCAAACGTTCTCAGAGGACAAAGTCAATCTTTGGAGGGCAGTCCTCCGCCAAGTTTGTAGCTTTTCAGGGGTGGATCTCCGATGTTCCAGGAATGAAGCTGAGGAAATCAATACGATTGTTAAAGAAATCACTAGGTTCATAGGCAATACACTCTTGTTTGTTGCTCAATATCCTGTTGGGTTAGAATCTCGTGTGGAACATGTGATCAATCTCTTAAACTTGCAACAATCAGAGAAGGTTTTGATATTAGGAATTTTGGGAATTGGAGGAATTGGAAAAACAACTATTGCCAAAGCCATTTACAATCAAATTCATCGTCGTTTTGAAGGCCATTGCTTCCTTCCAGATATTAGAGAATCTTGGAAGCAAAGCACTAACCGGGTTTATTTACAAGAACGACTTCTTTCTGATATCTACAAAACAACAAAGATAAAGATACATAACATTGAATCAGGAAAGTTTATATTACAGGAAAGGCTTCCTGGGAAAAGGTTACTCCTTATACTTGATGATGTTGATGAATTAGACCAACTAAGAGCTTTATGTGGGAGTCGCGAATGGTTTAGTCCTGGTAGTAGAATAATCATCACAACAAGAAATGAGCACTTACTCAAAGTGTTTCAAGCTGATCACATATCTAGGATGTCAATTATGGACGATGATGAATCTTTTGAGCATTTTACTTGGCATGCATTCAAAGAAAAAAGTCCTCAAAAAGATTTTCTTGAACTTGCTACAAAGGTAGTTGCATATTGTGGAGGATTACCCCTAGCTCATGAAGTTATTGGATCCTTATTGTTCAATAAGAAGAAAAAGTTGTGGGAAAGTGTACTGGAGAAACTTACAAGAATTCCCAATCATGAAATACACAGAAAACTAAGAATAAGTTTTGATAACTTAAGTGATGATACCGAAAAAGAGACTTTTCTTGATATAGCATTCTTCTTTATTGGGATGGATCGAAATGAAGTCATAAATATTTTAGATGAATATGATGCTGAAGTTGGAATAAGCACTCTTGTAGACCGAAGTCTTGTGACGGTTGATAAAAATAACAAACTTGGAATGCATGATTTGCTGCGAGATATGGGAAGAGAAATTGTCCGTGAGAAATATCCGAAGGAGCCAGAGGGGCGTAGCAGGTTATGGTTGCAGAAGGAAGTGCTTGAAGTGCTACAAAAACATATTGGTACAAATGCTATTGAGGGACTAACTTTGAAGTTGACAAGAACTGATACAATTTGTTTGAAGACTGAAGCATTTAAGGAGATGAAGAAACTCAGATTGCTTCAACTTGCAGGTGTACAACTTGGTGGAGATTTTGAATATATTTCAAAAGATCTAAGATGGCTTTACTGGCATGGATTTCCTTTGAAATATATGCCTTCAAACTTTTCTCAAACAAGCTTAGTTTCCATTGAGTTAGAATCTAGCAGTCTCAAATTAGTGTGGAAAGAGCCAAAGTTCCTTGAGAGGTTAAAAATTCTCAATCTTAGCCATTCTCAGCACTTGACACAAACCCCTAACTTCTCATACTTGCCTAATCTTGAAAAGCTGTTACTCAACGACTGTCCACGTTTGACTGCAATTTCAGAAACCATTGAACATCTCAAATACATTCTTTTGATCAATTTGGAAGATTGCACAAGCCTTCATAACCTTCCAAGAAGTTTCTATAAGTTGAAATCTCTGAAAACTCTCATTATTTCGGGATGCTCAATGATTGATAAATTGGAAAATGATTTGGACCAAATGGAATCCTTGGTAACTTTGATTGCAGACAAGACTGCAATAACACAAGTGCCATTTTCAATAGTAAGATCAAAAAGCATTGGATATGTTTCTTTGTGTGGTTATGAAGGATTCTCACGTGATGTGTTTCCTTCTCTCATTTGGTCATGGATGTCACCAACAAATAATTTCTCATCTCAAGTTGAAACATGTATGGATTTGGAACTTGTTTCCTCAGATGTAGGAAAGCTTCGAAGTTTGCAAGTGGAGTGCAACTCAGATTTTCAACTAGCTGAAGGTATTGCAAGAATTTTGGACACTCTATATGCAACATATTACAATGAATTAGAAGCAACACCAACTACATCACAAGTCTCAAACATGGGAAGTTCATCCATAATTAGTATTTGCAATCAATTTCAAATGAATGGATTAGTCAAGTCTCTTCTAATTGAAGTGGGAGTCAAGAACCAAGTCAGCAACATTCTTAGAGAGAGAGTTTTTCAGAAATTGAGCACCAATGAGCATGACAATTATTTGTTGCCGGGTGACAATTATCCTGATTGGTTGACCTTCAATTCTGATGGTGCTTCTATAATTTTCAATGTCCCTCACGGGAATGGACGTGACTTGAAGACAATGACAATGTGCATTGTGTATTCTTCTTCTGCGGACACCATCTCACTAAAATGTCTCAAGAATGTGTTGATAATAAATTACACAAAATCTACCATTCAAGTGTATAAGTGTGACACACTAGCTTCTCTTGAAGATGAGGAGTGGCAAAGCATAATTTCAAGTTTGGAACCCGGAGACAGAGTTGAGATTGTGATTGTTGTTTATGGGACAGAATTTGTTGTGAAGAAGACAACAGTTTATCTCATATATGGTGAGCCAAATAATGAAGATAGGGATGCTACCGATATGCCAGAAGATAAGAATGTTATTAGTTTTGGCAGAGCTAAAAATAGATTTCATGGACCTTTGTCTCTCGCCTCTGTTCTGGTCTCGCCGCTGTTCTGGATTGGTGTTGCTGGTTTTCTAATTTGGAAACATTGCCTATCTGACAAACGAAGAAGGTAA 3195 0.3853 MSSSEPKRWIYDVFLSFQGEDSRSTTASHLYNSLTQAGLYVFRDDEELQKGDQISPSLIRAIEASRISLVILSEHYAASTWCLEELEKIMECRRSIGQWVIPVFCDASPSKIRRQEGPIGEAFRQHLQTFSEDKVNLWRAVLRQVCSFSGVDLRCSRNEAEEINTIVKEITRFIGNTLLFVAQYPVGLESRVEHVINLLNLQQSEKVLILGILGIGGIGKTTIAKAIYNQIHRRFEGHCFLPDIRESWKQSTNRVYLQERLLSDIYKTTKIKIHNIESGKFILQERLPGKRLLLILDDVDELDQLRALCGSREWFSPGSRIIITTRNEHLLKVFQADHISRMSIMDDDESFEHFTWHAFKEKSPQKDFLELATKVVAYCGGLPLAHEVIGSLLFNKKKKLWESVLEKLTRIPNHEIHRKLRISFDNLSDDTEKETFLDIAFFFIGMDRNEVINILDEYDAEVGISTLVDRSLVTVDKNNKLGMHDLLRDMGREIVREKYPKEPEGRSRLWLQKEVLEVLQKHIGTNAIEGLTLKLTRTDTICLKTEAFKEMKKLRLLQLAGVQLGGDFEYISKDLRWLYWHGFPLKYMPSNFSQTSLVSIELESSSLKLVWKEPKFLERLKILNLSHSQHLTQTPNFSYLPNLEKLLLNDCPRLTAISETIEHLKYILLINLEDCTSLHNLPRSFYKLKSLKTLIISGCSMIDKLENDLDQMESLVTLIADKTAITQVPFSIVRSKSIGYVSLCGYEGFSRDVFPSLIWSWMSPTNNFSSQVETCMDLELVSSDVGKLRSLQVECNSDFQLAEGIARILDTLYATYYNELEATPTTSQVSNMGSSSIISICNQFQMNGLVKSLLIEVGVKNQVSNILRERVFQKLSTNEHDNYLLPGDNYPDWLTFNSDGASIIFNVPHGNGRDLKTMTMCIVYSSSADTISLKCLKNVLIINYTKSTIQVYKCDTLASLEDEEWQSIISSLEPGDRVEIVIVVYGTEFVVKKTTVYLIYGEPNNEDRDATDMPEDKNVISFGRAKNRFHGPLSLASVLVSPLFWIGVAGFLIWKHCLSDKRRR* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1969 1064 ProSiteProfiles TIR domain profile. 9 178 IPR000157 GO:0007165
Ahy12g1969 1064 Pfam NB-ARC domain 189 412 IPR002182 GO:0043531
Ahy12g1969 1064 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 150 IPR035897 -
Ahy12g1969 1064 Gene3D - 424 494 IPR036388 -
Ahy12g1969 1064 SUPERFAMILY L domain-like 532 824 - -
Ahy12g1969 1064 Pfam TIR domain 11 170 IPR000157 GO:0007165
Ahy12g1969 1064 Gene3D - 5 176 IPR035897 -
Ahy12g1969 1064 Gene3D Ribonuclease Inhibitor 519 747 IPR032675 -
Ahy12g1969 1064 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 998 IPR044974 GO:0006952
Ahy12g1969 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 439 IPR027417 -
Ahy12g1969 1064 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 24 998 - -
Ahy12g1969 1064 SMART till_3 10 148 IPR000157 GO:0007165
Ahy12g1969 1064 Gene3D - 344 423 IPR042197 -
Ahy12g1969 1064 PRINTS Disease resistance protein signature 379 393 - -
Ahy12g1969 1064 PRINTS Disease resistance protein signature 286 300 - -
Ahy12g1969 1064 PRINTS Disease resistance protein signature 686 702 - -
Ahy12g1969 1064 PRINTS Disease resistance protein signature 209 224 - -
Ahy12g1969 1064 SUPERFAMILY "Winged helix" DNA-binding domain 415 520 IPR036390 -
Ahy12g1969 1064 Coils Coil 702 722 - -
Ahy12g1969 1064 Gene3D - 177 339 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1969 Ahy-Chr12 101920309 101930823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1969 11 732 WRKY Transcription Factor Family AT4G12020 29.853 6.92e-73 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1969 - - ahf:112727938 2081.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1969 12 101920309 101930823 Ahy2g1678 2 87549880 87553431 hybridization