Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1958 ATGGCAATATGGGGAATGGGAGGAATAGGTAAAACAACAGTTGCCAAAGCCCTCTACAATCAAATTAGTCACAATTTTGATGTGAGGAAATTTGTCCCGGACATAGATGAAAGGATGGAGGATTTCCCAAGAAGGTGGCCTTTGGGCATTATAGAAGAGGAGCTTCTTTTGTTTCTCAAAGAACAAGTTGCAACAAAAGCTTGCAATTTCGACTCAACAAGTGTTATATGGTGGGAAGGAATTCGTTGTGTAAAGGTATTGCTTGTACTTGACAATGTGAGAAGTGAAAAAGAGCTAGAGGTTTTGCCTGTAACTTGTGAATGCTTTGGTCCTGGGAGTATAATAATCATCACCACAAGGACTAAACATGATCAGTTTAATGAGACTGGAATTAATCATGTTTACAGACTGAAAGAAATGGATTACAACGAATGTGTTGAGCTTTTTAGTCAGAGTGCTTTCAAGAAAGCAACTCCTGAAAGGACTTATGCTGATCTGATCAATCGTGCACTTGAATATTCTGATGGATTGCCACTAGCTCTTGTGGCGGTTGGATCTGTATTATTTGAAAGAAGTAGAGTAGAGTGGGACAGTGTATTGGAAAGGCTTAAAAGATTTCCCCTTCAAGATGTATGGCAAGTTTTAAGAAAAAGCATTGATTCTTTGGGATATGATATGAAGCAAATGTTTCTTGTGCTAGCTTATTTGAGTCATTTCTTTATTGGAATGGACCGAAATGATGTAACTCAAATATTACAAAAAGCTGGATGTGATGTGGTAGTGGCACTAAAAGCAATCAAAGGGCTTGAAGATCATAGTCTTGTGTCGTTTGAGAAGGACAAGTTTCGCATGCATCGTTTGATACAAGACATCGGAAGAGAAATGTATCTGAAAGAATCATCTATTAAGCCTCAGCAAAGGCCTTATGATGTATTCTTGAGTTTTCGAGGCAAAGACACTCGTTCCAATTTCATGTCGCATCTTCATGCATCTCTTGAAAATGCTAGTATCTATGTTTTCAAGGATGATGATGAGGAAGCAAGAGGGGAAAATATCTCACTTTCCCTTCTAAAAGCAATTGGAGAGTCTAGAATTTCTATCATCATTTTGTCACCAAATTATGCAGATTCAAAATGGTGCTTGCAGGAGTTGGAAGACATAATGAGATGTTATAATAATCAAACTCAAAAGGTGTTGCCAGTGTTCCACCATGTTGATCCGTCGGAAGTGCGAAATCAAGCTGGTAAATTTGGAGAGGCTTTTGAAGAATTTATAAAGAAAAACCCCCAAAATAAAGTCAAAGAGCAGGATTGGAGGAAAGCACTCCGTGATGTCGGTTCCACTGCTGGATTTGTTGTTCAAAATTGGAGGAATGAAAGTGAGGATATTAAGAAGATTGTTGAACATGTTACTCATATGCTAGACCTGAATGAATTGTTCATTGCTAATCATCCAGTAGGAGTAGAATCTCGTGTAAAAGAGCTGATTGAACTACTAAAAAGCCATCAATCAGAAGATCCTCTACTATTAGGCATATGGGGCATGGGAGGGATCGGTAAAACAACCATTGCCAAAGCAGTTTATAATAAAATTTGCCGTCAGTTTGATGGTCGATGTTTCCTCTTAAATATCAGGGAAGTTTGGGATCAAGATAATGGTGGCCTTCATTTGCAGCAGCAACTTCTTTCTTCTGTCTATAAGACAACAAAAATAAAGATACAGAACATAGAATCTGGAAAATCAATATTAGAGAAAAGGCTTGGACAGAAAAGGATACTTGTTGTACTTGATGATGTGGATAAATTGGAGCAACTTAATGCTTTGGCTGCAAGCTATAAATGGTTCTGTCCAAGGAGTATAATAATCATCACAACAAGAGATGAAAGATTTCTTAGTTGGCTTGAAATTGACAAAAGATACAAAATGGAAGGGTTGAATGAGGAAGAATCTATTGAACTTTTCAGTTGGCATGCATTCAAAGAACCACGTCCTAGGAAAAAATTTGCTACACTTTGTGGTGAAGTTATTTCCTATTGTGGGAATTTGCCATTAGCTCTTGAGGTCATTGGGTCACATTTGTTTGAAAGGGGAATAAAAGAGTGGAAGAGTGTCTTGAACAAACTCAAAAGCATTCCCAATAAAGAAGTGCAAAAGAAGCTTAAGATAAGCTTTGATGGTTTAAGTGATGACAAAGATAGAGAAATATTCCTTGATATAGCTTTTTTCTTTATTGGAATGGACAAAAATGATGTCACTGATATACTAAATGGTTGTGGACATTCTGCTGGAATTGGAATAAGTATTCTTTTGGAGCGATGTCTTGTAACTGTTGACACTAAGAATAAACTTCGAATGCATGGTTTGCTGAGAGACATGGGAAGAGAAATCATTCGCGAGAGTTCTCCAACAAAACCTGAAGAACGTAGTAGGTTATGGCATTCAGAGGAGGTGCTTGATGTATTATCAAAAGACTTGGGAACAAAAGCTACCGAGGGAATTGCTTTGAAGTTATCAAGGATGAATCCAATTTGTTTGAAGACCAAAGCATTTAAGTACATGAGGAGACTCAGATTACTTCAACTTGCTGGTGTGCAACTTAAAGGAAACTTCAAACACCTTTCGACAGACCTTCGATGGCTATGCTGGCATGGATGCCCTTCAAGATATACAGAAGCAAAGTTTGATCAAAGAAATTTAGTTGCCATTGACTTAAAATATAGCTACCTCCAACATGTATGGAAGAAGGGCCAGATGATGAAGAAACTGAAAATTCTCAATCTTAGTCATTCCGAACACTTGACACATACTCCAGACTTTTCATACTTGCCCAATCTTAAAAAGTTAATACTCAAAGATTGTCCAAGATTGTGTTCAATCTCCCACACCATTGGACATCTCAAACGAATTCTTCTAATCAACTTGAAAGATTGTACAAGCCTTCGAGTGCTTCCGAAAAGCATCTACAAATTAAAATCTCTCAAAACTCTCATTCTGTCTGGATGTACAAAGATTGACAAATTGGAAGAGGACTTAGAACAAATGAAATCTTTGACAACATTGATGGCAGATAACACTGCTATAACCAAAGTTCCCTATGCACTACCAAGATTAAACAACATTGTTTACATTTCTTTGTGTGGGTTCGAAGGATTGTGTCGTAATGTGTTTCCTTCAATCATCTGGTCATGGACCTCTCCAACAAATAATCTCTCACCCCAAATGCATACAAATTTGGACCTGTCAAATCTTGTTTCCATAATGGTATCCAATAGCAGTAGTTCCCATGCAGGCCTATCATCCATCATTAAAGAGCTTCCAAAGGTTCAGAATCTTCAATTGGAATGTGGCTCACAACTAAACATGTCAGGAAATGTAAATTTAGTTTCTTCTAGTGTCACAAATTTTAAGGAACTGGAAGCACCATCAAGAACATCACATGTCTCAAATATGAATACCTCAGCATTAGGTGGTTGTTGCAGTGAAGGTTACATTTCTAGATCAGAGAACTCCTTGAATATCATTTTAATCCGAATGGGAATGAATTGCTTAATCACAAAAGCACTCATTCAGAGAATTTCACAGAAGCTTACTAGCAATTTAGCTGGAGATTTTTTGCTTCCTGGAAACAACAATCCTGATTGGTTAACCTTCAGCAGTGAAGGTTCTTCTGTGAGTTTTGAAGTTCCAAAAGTTAATGGCCGCAGCTTGAAGGCGGTGATACTGTGCATTGTTTACTCTTCTTCCTCAAACATCATAGCATCTGAAGGAATAACTCTAAAGAATATGATGATCATAAATTACACAAAAGCCACCACTCATGTCTATGAGGGAGATACCTTGTCTTCACTTAAAGGTGAAGACTGGCAGAGTGTCTTATCAAATCTTGAAGCCAGTGACAAAGTGCAGGTTGTTGCTGTTGTTTTGGGGTATGGATTCAAAGTGAAGGAAACAACAGTTTATCTCATATATGATGATCCAATTGACCAAACCATGAAGCAACAGGATGAAGGTATTGTTTCTGGTATTGATATGGTAGCAGATGAGAATGTAACTGTCCATGGTGGAGATGAAAAAGAAGAATTTAAACTCCTTAGAAAGAGAAAATTCCAAGAGTATGATGATACATCTAGTGAAGATGACAGAGTGGGAGATGTTTAG 4158 0.3761 MAIWGMGGIGKTTVAKALYNQISHNFDVRKFVPDIDERMEDFPRRWPLGIIEEELLLFLKEQVATKACNFDSTSVIWWEGIRCVKVLLVLDNVRSEKELEVLPVTCECFGPGSIIIITTRTKHDQFNETGINHVYRLKEMDYNECVELFSQSAFKKATPERTYADLINRALEYSDGLPLALVAVGSVLFERSRVEWDSVLERLKRFPLQDVWQVLRKSIDSLGYDMKQMFLVLAYLSHFFIGMDRNDVTQILQKAGCDVVVALKAIKGLEDHSLVSFEKDKFRMHRLIQDIGREMYLKESSIKPQQRPYDVFLSFRGKDTRSNFMSHLHASLENASIYVFKDDDEEARGENISLSLLKAIGESRISIIILSPNYADSKWCLQELEDIMRCYNNQTQKVLPVFHHVDPSEVRNQAGKFGEAFEEFIKKNPQNKVKEQDWRKALRDVGSTAGFVVQNWRNESEDIKKIVEHVTHMLDLNELFIANHPVGVESRVKELIELLKSHQSEDPLLLGIWGMGGIGKTTIAKAVYNKICRQFDGRCFLLNIREVWDQDNGGLHLQQQLLSSVYKTTKIKIQNIESGKSILEKRLGQKRILVVLDDVDKLEQLNALAASYKWFCPRSIIIITTRDERFLSWLEIDKRYKMEGLNEEESIELFSWHAFKEPRPRKKFATLCGEVISYCGNLPLALEVIGSHLFERGIKEWKSVLNKLKSIPNKEVQKKLKISFDGLSDDKDREIFLDIAFFFIGMDKNDVTDILNGCGHSAGIGISILLERCLVTVDTKNKLRMHGLLRDMGREIIRESSPTKPEERSRLWHSEEVLDVLSKDLGTKATEGIALKLSRMNPICLKTKAFKYMRRLRLLQLAGVQLKGNFKHLSTDLRWLCWHGCPSRYTEAKFDQRNLVAIDLKYSYLQHVWKKGQMMKKLKILNLSHSEHLTHTPDFSYLPNLKKLILKDCPRLCSISHTIGHLKRILLINLKDCTSLRVLPKSIYKLKSLKTLILSGCTKIDKLEEDLEQMKSLTTLMADNTAITKVPYALPRLNNIVYISLCGFEGLCRNVFPSIIWSWTSPTNNLSPQMHTNLDLSNLVSIMVSNSSSSHAGLSSIIKELPKVQNLQLECGSQLNMSGNVNLVSSSVTNFKELEAPSRTSHVSNMNTSALGGCCSEGYISRSENSLNIILIRMGMNCLITKALIQRISQKLTSNLAGDFLLPGNNNPDWLTFSSEGSSVSFEVPKVNGRSLKAVILCIVYSSSSNIIASEGITLKNMMIINYTKATTHVYEGDTLSSLKGEDWQSVLSNLEASDKVQVVAVVLGYGFKVKETTVYLIYDDPIDQTMKQQDEGIVSGIDMVADENVTVHGGDEKEEFKLLRKRKFQEYDDTSSEDDRVGDV* 1386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1958 1385 Gene3D Ribonuclease Inhibitor 804 1192 IPR032675 -
Ahy12g1958 1385 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 307 IPR044974 GO:0006952
Ahy12g1958 1385 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 319 1320 - -
Ahy12g1958 1385 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 3 307 - -
Ahy12g1958 1385 Gene3D - 1 127 IPR027417 -
Ahy12g1958 1385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 233 IPR027417 -
Ahy12g1958 1385 CDD AAA 486 639 - -
Ahy12g1958 1385 Pfam TIR domain 309 472 IPR000157 GO:0007165
Ahy12g1958 1385 Pfam NB-ARC domain 1 222 IPR002182 GO:0043531
Ahy12g1958 1385 Pfam NB-ARC domain 489 719 IPR002182 GO:0043531
Ahy12g1958 1385 SUPERFAMILY Toll/Interleukin receptor TIR domain 300 451 IPR035897 -
Ahy12g1958 1385 SUPERFAMILY "Winged helix" DNA-binding domain 715 821 IPR036390 -
Ahy12g1958 1385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 472 739 IPR027417 -
Ahy12g1958 1385 SMART till_3 308 448 IPR000157 GO:0007165
Ahy12g1958 1385 PRINTS Disease resistance protein signature 509 524 - -
Ahy12g1958 1385 PRINTS Disease resistance protein signature 586 600 - -
Ahy12g1958 1385 PRINTS Disease resistance protein signature 679 693 - -
Ahy12g1958 1385 PRINTS Disease resistance protein signature 988 1004 - -
Ahy12g1958 1385 SUPERFAMILY L domain-like 833 1133 - -
Ahy12g1958 1385 Gene3D - 306 479 IPR035897 -
Ahy12g1958 1385 Gene3D - 140 230 IPR042197 -
Ahy12g1958 1385 Gene3D - 644 728 IPR042197 -
Ahy12g1958 1385 Gene3D - 480 638 IPR027417 -
Ahy12g1958 1385 ProSiteProfiles TIR domain profile. 307 474 IPR000157 GO:0007165
Ahy12g1958 1385 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 319 1320 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1958 Ahy-Chr12 101649951 101655800 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1958 1 307 WRKY Transcription Factor Family AT4G12020 25.879 8.57e-18 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1958 - - ahf:112727932 2718.34