Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1956 ATGACTTCCTCCACCACCAGAAACCAATATAGGGTTAATCCCTACAGAACAAGGATGTATGATGTGTTCATCAGTGTCAGTCGCCAACACCCTCATCGTCAACACTTCGCTTCACGCCTCTGTGGCGCTCTCATAGATGCTGGGGTACATGTTTGTGACGAGATACTTCTTAGAACAGGAGACTTTGTCTTTTCCCAGAGTGTGGGTGTACCGGCCGGAATCGAAGGTTCCAGAGTTTCTGTCATCATCTTCACAAAAGAATACTTGGATTCAGCATGGTGTTTCCAAGAGCTACTGAAAATTATGGAGTGTCGAAGTAGCAAGGCTCAGGTGGTTGTTCCAGTGTTCTGCGGTGTAGATCCGTCAGAAGTAAGGGATTATTCTGGTCACTTTGGAAGAGTTATGACTTCTCTTGATGGAAAATCAACACCGCGGCCGTGCCATGTTACCACGCTTCAAGAAGCCGCTGACATTTCACCAAGTTTTGTGACAGTTTCCGGGAAGGAAATGGAATCTATCAAGAGTATTGTTGAACATGTTGCTTTTTTAATAGATTCAAGAGACCTATTTGTTGCACAGCATCCTGTGGGAATTAAATCTCGTGTGCAAGATTTAATTCAAATATTAAACATTCATGAGAAACCAAATGATGTTCTTGTACTAGGGATTTGGGGAATGGGAGGAGCTGGTAAGACAACAATTGCCAAAGCTCTCTACAATAAAATTCGTCGTAAGTTTGAAGTGAGAAAATTCATCCCAGATATTAGCGATAGAATGGAGCAAAATGAAATGGATTCTTTGGCATCTTTACGAGATGAGATTCTTCATTGCATGAACCGAAAGAAAGCACTTCTTATACTTGACAATGTGGGAAGCAACAAAGAATTAGAGAATTTGCTTGTAAGTCATACATTGTTTGGTCCTGGTAGCATAATAATCATCACAACTAGGAATAAGCAACCACTTTATCTGGTTAGAGTTGACCATATATATAGAGTGAAAGAAATGGACTACAACGAATGCGTTGAGCTTTTTAGTTGGTGTGCATTCAAGAAAGCAACTCCTAGAAGAACATTTGCTGGGCTTATTAAGGAAGTAGTTGAATATTCTGATGGATTGCCATTGGCTATTGTAGCTTTTGGCTGTGTTTTAAGTGGAAGAAATATAGCAGAGTGGGGGATTGTATTGGATAGGGTCAAGATATTTCCCATTCAAGATGTCCAAGAGGTGTTAAAAATAAGCATTAATCGTTTGGATCACAAAGAGAAACAAGTATTTCTTGAGATAGCTTATTTCAGTCATGCGTTTAGTGGAATGTCGCGAAAAGATGCAATGCAGATATTAAATGGGTCTGAAGGAATTTTGGGGCTTGAACGCCAGAGTCTAGTGACGTTTGAGGAGAACAAGCTTCGCATGCATCCGTTGCTACAAGAGATAGGAAGAGAAATCTATCAGAAGGAATCATCTTCATTTAATCCTCAGCGAAAGGTATATGATGTATTCTTGAGCTTTCGTGGTACAGACACTCGTTCCACGTTCACCTCACATCTTCACGCATCTCTTGAAAATGCTGGCATTTATGTTTTTAAGGATGATGATGGACTTCTAAGAGGAGAGCAGGTCTCAATCTCACTTCTAAAAGCAATTGAAGAGTCTAAAATTTCAATCATTATTTTGTCACCAAATTACCCCAATTCAAAATGGTGTTTGAAAGAGCTGGAGACCATTATGCTGTATCATAAAAACAAAGCTCAAAAGGTGTTGCCAGTGTTCTATGGTGTAGATCCCTCGGAAGTGCGCAATCAAACAGGAGAGTTTGGACGAGCTTTTAAAGTTCTAATAGAAAGAATCCAAAAGAATAGAGACAATGAGCAGAGTTGGAGAGCAGCACTCAAACAAGTTGGTTGCATCTCAGGGTTTGTCATTCAACAATCAAGAAACGAAAGTGAGGCTATTAAGAACATAATTGAACAAGTCACTCGGATGCTAGACATGAAGGACCTGTTTGTTGCTAACCATCCAGTAGGAGTAGAACTTCGGGTTGAAGAGGTGATTAAAATGTTGAGGAATCAAAACACAAAAGATCCTCTATTATTAGGGATATGGGGCATGGGAGGGATCGGTAAAACAACTATTGCCAAAGCAGTTTATAACAAAATTTGTCGTGAATTCGAGGGTCGATGCTTCCTCTTAAATATCAGGGAAGTTTGGGATCAAGATAATGGCGGAGTTCATTTACAGGAACAACTTCTCTCCAGTATATACCAAACAATGAAACTAAAGATACAAAACGTGGAATCTGGAAAAGTGATATTAGAGGAAAGACTTGGCCAAAAGAAGATACTTGTTGTACTTGATGACGTGGACAAATTGGAGCAACTAAATGCTTTGGCTGCAAATCGTAAATGGTTCTGCCCAGGGAGTGTAATAATCATCACAACAAGGGATCAACGTCTTCTTAATTGGCTTCGAGTTGACAAGGTATATAGGCTGGAAAAGTTGAGTGACAGAGAATCTGTCGAACTTTTTAGTTGGCATGCATTTAAGGAACCATTTCCTATTGAAGAATTTGTCGGGTTTACAAGTAAAGTGGTCTCCTACTGTGGGAGATTACCGTTAGCACTTGAGGTTCTTGGATCACATTTGTTTAAAAGGGGAATACAAGAGTGGATAAGTGTTTTGGAGAAACTCAAAAACATTCCCAATGAGCAAATACAAAAGAAGCTGAAAATAAGCTTTGATGGTTTAAACGATGACGAAGATCGGGAAATATTCCTTGATATAGCTTTTTTCTTTATCGGAATGGACAAAGACGAAGTAATTGATATATTGAATGGCTGTGGATATTCTACTGAAATTGGGATCAGTGTTCTCAGGGAACGATCTCTTGTAACAATTGACTCTAAGAACAAACTTAGAATGCATTATTTGTTGCGAGATATGGGAAGAGAAATCATTCGTGAGAATCTACCTTTACCCGAAGAACGCAGTAGATTATGGAATCCAGAAGAAGTGCTTGATGTCTTATCAAAAGACATGGGAACAAAAGCTATTCAGGGACTTGCTTTGAAGTTGTCAAGGATGAAACCAATTCATTTGAAGACCAATGCTTTTAGGAAGATGAAGAGACTAAGATTGCTTCAACTTGGTGGTGTACAACTCGATGGAGACTTTAAATACCTCTCAACCGATCTTCGATGGTTGTCCTGGCATGGATGTTCTTCAGAATATACAACTATAGGTTTTGATCAGGGAAATTTAGTTGCCATTGACTTCAAATATAGCAATCTCCAGCTAGTATGGAAGAAGAGGCAGATGCTAATGAAGTTGGAAATTCTCAATCTTAGTCATTCTCAATATTTGACAGAAACTCCTGACTTTTCAAACATTCCTAATCTTAAAAAGTTAATACTCAAATATTGTTCAAGGCTATCTTTGGTTTCCCATACCATTGGAGATCTTAAAAAAATTCTTCTAGTCAATCTGAAAGGTTGCACAAGCCTTCGTATACTTCCAAGAAGCATCTACAAGTTGAAATTTCTGAAAACTCTCATTCTTTCTGGATGTTCAGAAATTAACAAGTTGGAAGAGGATTTAGAACAGATGGAATCTTTGACAACTTTGATGGCCAATAAAACTGCTATAACACAAGTGCCAAATGCATTGATAAGATTGAAAAGCATTGTATATGTTTCTTTGTGTGGCTTTGAAGGATTGTCCCGTGATGTGTTTCCTTCAATCATTTGGTCATGGACCTCCCCAACAAATAACCTCTCACCCCAAATGCAAACATATGCAAATGTTTCATGTCTTGTTTCTTTAACTGTGCCAAATAATAGCTTCCATGGTACATCATCCATTATCGGAGAGCTCCCAAATATTCAGGGTATCAGGTTAGAAAGCGGTTCACAAATACAAACAACCGGAGATTTTACCTTGGATGCCATCAATATAAAAAATTGTAAGGAACTGGAAGCACCACCAGCCATATCACATGTTTTAAAAATGGATACCTCAGCCTTAGTTGATTGTCGCAGTCAAGGTGACATGTCTATATCAAAAGCTACCATCAGTTTCATTTTAATTCAAATGGTAACGAACTGTCCGGTCACAAAAATACTCAGAGAAAGCATTTCACAGAAACTGGCTGCCAGTACCAGTGATGTGGGAGAATGTTTGCTCCCTGGTGACAACAATACTGATTGGTTAAGTTTCAATGGTGAAGGTTCTTCTGTGATTTTCGAAGTCCCTAAAGTGAAAGGGCATAATTTGAAGGCAGTGACATTGTGCATTGTTTATTCCTCCCCAGATATCATGACATATGAAGGCCTAATTCTTAAAAATCTGTTGATCATTAATCACACAAAGACCACTCCTTATCTATATGAGGGAGATACCTTGCTTTCACTTAGAGATGAAGATTGGCAGAATGTCATATCAAATCTTGAAGCTGGTGACAAAGTTCAGGAGGTTGTTGTTTTGGGGGATGGAATCGTTGCGAAGAACACTGCAGTTTACCTCATTCATGATGAGTCGATCGACCAAAACATTGATGAATGCCAAGAAGATGTCATTGTGAATAGCATGGTTGTTGGTAAGAAAGAAGATGCTTCTAATGTTGATGATATGAGAGATAAGAATTTCAGTGTCCCTGCTGTTGATGCTACACCTGCAATCAGTAATAAGATTCCTGTTTCCGGCACAGATAAAAAATTCAAGTTGTTGGACAAATTGAATTGCTTCAACTGCAACAGAGCAAAATTGTAA 4767 0.3881 MTSSTTRNQYRVNPYRTRMYDVFISVSRQHPHRQHFASRLCGALIDAGVHVCDEILLRTGDFVFSQSVGVPAGIEGSRVSVIIFTKEYLDSAWCFQELLKIMECRSSKAQVVVPVFCGVDPSEVRDYSGHFGRVMTSLDGKSTPRPCHVTTLQEAADISPSFVTVSGKEMESIKSIVEHVAFLIDSRDLFVAQHPVGIKSRVQDLIQILNIHEKPNDVLVLGIWGMGGAGKTTIAKALYNKIRRKFEVRKFIPDISDRMEQNEMDSLASLRDEILHCMNRKKALLILDNVGSNKELENLLVSHTLFGPGSIIIITTRNKQPLYLVRVDHIYRVKEMDYNECVELFSWCAFKKATPRRTFAGLIKEVVEYSDGLPLAIVAFGCVLSGRNIAEWGIVLDRVKIFPIQDVQEVLKISINRLDHKEKQVFLEIAYFSHAFSGMSRKDAMQILNGSEGILGLERQSLVTFEENKLRMHPLLQEIGREIYQKESSSFNPQRKVYDVFLSFRGTDTRSTFTSHLHASLENAGIYVFKDDDGLLRGEQVSISLLKAIEESKISIIILSPNYPNSKWCLKELETIMLYHKNKAQKVLPVFYGVDPSEVRNQTGEFGRAFKVLIERIQKNRDNEQSWRAALKQVGCISGFVIQQSRNESEAIKNIIEQVTRMLDMKDLFVANHPVGVELRVEEVIKMLRNQNTKDPLLLGIWGMGGIGKTTIAKAVYNKICREFEGRCFLLNIREVWDQDNGGVHLQEQLLSSIYQTMKLKIQNVESGKVILEERLGQKKILVVLDDVDKLEQLNALAANRKWFCPGSVIIITTRDQRLLNWLRVDKVYRLEKLSDRESVELFSWHAFKEPFPIEEFVGFTSKVVSYCGRLPLALEVLGSHLFKRGIQEWISVLEKLKNIPNEQIQKKLKISFDGLNDDEDREIFLDIAFFFIGMDKDEVIDILNGCGYSTEIGISVLRERSLVTIDSKNKLRMHYLLRDMGREIIRENLPLPEERSRLWNPEEVLDVLSKDMGTKAIQGLALKLSRMKPIHLKTNAFRKMKRLRLLQLGGVQLDGDFKYLSTDLRWLSWHGCSSEYTTIGFDQGNLVAIDFKYSNLQLVWKKRQMLMKLEILNLSHSQYLTETPDFSNIPNLKKLILKYCSRLSLVSHTIGDLKKILLVNLKGCTSLRILPRSIYKLKFLKTLILSGCSEINKLEEDLEQMESLTTLMANKTAITQVPNALIRLKSIVYVSLCGFEGLSRDVFPSIIWSWTSPTNNLSPQMQTYANVSCLVSLTVPNNSFHGTSSIIGELPNIQGIRLESGSQIQTTGDFTLDAINIKNCKELEAPPAISHVLKMDTSALVDCRSQGDMSISKATISFILIQMVTNCPVTKILRESISQKLAASTSDVGECLLPGDNNTDWLSFNGEGSSVIFEVPKVKGHNLKAVTLCIVYSSPDIMTYEGLILKNLLIINHTKTTPYLYEGDTLLSLRDEDWQNVISNLEAGDKVQEVVVLGDGIVAKNTAVYLIHDESIDQNIDECQEDVIVNSMVVGKKEDASNVDDMRDKNFSVPAVDATPAISNKIPVSGTDKKFKLLDKLNCFNCNRAKL* 1589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1956 1588 SUPERFAMILY Toll/Interleukin receptor TIR domain 488 639 IPR035897 -
Ahy12g1956 1588 SUPERFAMILY L domain-like 1022 1305 - -
Ahy12g1956 1588 Gene3D Ribonuclease Inhibitor 1010 1356 IPR032675 -
Ahy12g1956 1588 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 507 1507 IPR044974 GO:0006952
Ahy12g1956 1588 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 486 IPR044974 GO:0006952
Ahy12g1956 1588 Pfam NB-ARC domain 680 908 IPR002182 GO:0043531
Ahy12g1956 1588 Pfam NB-ARC domain 202 407 IPR002182 GO:0043531
Ahy12g1956 1588 Gene3D - 833 917 IPR042197 -
Ahy12g1956 1588 Gene3D - 336 419 IPR042197 -
Ahy12g1956 1588 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 507 1507 - -
Ahy12g1956 1588 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 30 486 - -
Ahy12g1956 1588 ProSiteProfiles TIR domain profile. 18 156 IPR000157 GO:0007165
Ahy12g1956 1588 SUPERFAMILY "Winged helix" DNA-binding domain 904 1009 IPR036390 -
Ahy12g1956 1588 Pfam TIR domain 498 662 IPR000157 GO:0007165
Ahy12g1956 1588 Pfam TIR domain 20 142 IPR000157 GO:0007165
Ahy12g1956 1588 PRINTS Disease resistance protein signature 1176 1192 - -
Ahy12g1956 1588 PRINTS Disease resistance protein signature 868 882 - -
Ahy12g1956 1588 PRINTS Disease resistance protein signature 775 789 - -
Ahy12g1956 1588 PRINTS Disease resistance protein signature 698 713 - -
Ahy12g1956 1588 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 427 IPR027417 -
Ahy12g1956 1588 Coils Coil 1192 1212 - -
Ahy12g1956 1588 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 137 IPR035897 -
Ahy12g1956 1588 CDD AAA 675 833 - -
Ahy12g1956 1588 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 668 928 IPR027417 -
Ahy12g1956 1588 ProSiteProfiles TIR domain profile. 496 663 IPR000157 GO:0007165
Ahy12g1956 1588 SMART till_3 19 173 IPR000157 GO:0007165
Ahy12g1956 1588 SMART till_3 497 637 IPR000157 GO:0007165
Ahy12g1956 1588 Gene3D - 495 660 IPR035897 -
Ahy12g1956 1588 Gene3D - 189 328 IPR027417 -
Ahy12g1956 1588 Gene3D - 661 827 IPR027417 -
Ahy12g1956 1588 CDD AAA 196 332 - -
Ahy12g1956 1588 Gene3D - 14 184 IPR035897 -
Ahy12g1956 1588 SMART AAA_5 217 337 IPR003593 -
Ahy12g1956 1588 SMART AAA_5 695 835 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1956 Ahy-Chr12 101581374 101599136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1956 13 489 WRKY Transcription Factor Family AT4G12020 26.087 1.33e-33 140