Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1955 ATGCAGAATGAAAGTGAAGATATTAGGAACATTGTTGAACATGTTACTCATATGCTAGACATGAAAGAATTGTTTGTTGCTAATCATTCAGTAGGAGTCGAATCTCGTGTTGAAGAGGTGATTGAACTATTAAGAGACCGGCAACAAGAAAATCCTGTACTAGGTATATGGGACATGGCAACCACAATGACGTTGGTTTGTTCAATGGGACTCAACATAGAAGGTGTAAGCTCTCTGGGTACTTCTCTAAGTTTTGAAACCTCCTACACCCTCACTCGCTTGATCATTCAAGTCGTTGCTATGTCTTCCGAAAACCAGGAACCCCAATCCACATTCAATCCTTACAGAACAACGATGTGTGATGTGTACATTAGTGGCGAACCCCAAAACCCTCCTCATCCTTTTATTTCACATCTCTATGTTGCACTCAAAGGTTCTGGAGTATATGTTTTGGGGAATCACACAGAGCCCAACATTAATGACCTTTTCTTATCTGGCGCAATTGAAGGGTGCAGAGTTTCTATCATAGTTTTCACAACAGATTATGCTAAATCAACCGTGTGTTTGCAAGAGCTCGTGAAAATAATGGAGTGCCATCGGAGAAGCAAAGTTCAGAAGGTTGTGCCTGTGTTCTATTGCTTATATCCTTCAGAAGTAAGCAATCAGAGCGGTTATTTTGGAGAAGTTTTGTTAGATACTCTGGAAAGAAACTCAACAGATGAAAGCAAGGTGTTGAGTTATAGGACCGCACTTCGAGAAGCTTCGGCCATTTCACCCACGTTTCTGCCGGATATCTGGAATGAAAGAAAAGTTATAGAGAATATTGTTGGACATGTTACTTCTTTGCTAGATGCAACAGATTTATTCGTTGCACAGAATCCTGTGGGAGTACACTCTCATGTGCAAGATTTGATTCAATTGTTAAATAATCAGAATGAAGATGGTGTTCTGATAATGGCGATATGGGGAATGGCGGGTATAGGTAAAACAACTATCGCTAAAGCCCTCTACAACCAAATTAGCCACAACTTTGAGGTGAAGAAATTTGTCCCAAACATCAAGGATAGAATAATGAAAAATTCATCAAGAACGTCTAGTTTAGAAGAGGAGCTTCTATTATTTTTCCAAGAACGAGTTACAACAAAAACGCATAACGCTGACTCAACAAGAGATAAATGGTGGGGACTTCCTCACATAAAGGTACTTCTTATACTTGACGATGTAAGAAGTGAAAGAGAACTGGAGGTTTTGCCAGTAACTCGTGAATGCTTTGGTCCAGGGAGTATAATAATCATCACGACAAGAACTAAACAAGATCGGCTTCATGAGATTGGAGTTAATCATATATATAGAGTGAAAGAAATGGACTACAACGAATGTGTTGAGCTTTTTAGTTGGAGCGCATTCAACAAAGCCACTCCTGAAAGAAGTTATTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTGCCACTGGCTCTTGTGTGTGTTGGCTCTGCTGTATCTGAAAAAAGTATACAAGAGTGGGAGAATGTATTGGACAGCTTCAAAAGATTCCCCTTTCAAGATGTATGGCAGGTTTTAAAAGAAAACATAGATTCTGTTGGATCTGAAGAAAAGAAAATATTCCTTGAACTAGCTTATTTGAGACATCTCTTTATTGGAATGAATCGAAATGATATAAGTCAGATATTACAAGAAGCTGTACGTAATGCCGCACCAAGAGCAATTAAAGGGCTTGAAGAGCATAGTCTTGTGTGGTTTGACGAGGACAAGCTTTGCATGAATCGTTTGCTACAAGACATCGGAAGAGAAATGTATATGAAGAAATCCTCGATTGAGCCTCAGCAAAGGCCATATGATGTATTCTTGAGCTTTCGAGGCAAAGAAACTCGCTCAAAGTTCATCTCACATCTTTATGCATCTCTTGAAAATGCTGGTATCTATGTTTTCAAGGATGAAAACGGGCTAGCAAGAGGGGAAAAACTCTCAATCTCGCTTCTGAAAGCAATTGGAGAGTCTAAAACTTCTATCATTATTCTGTCACCAAATTATGCATTTTCAAGATGGTGTTTGCAAGAGTTGGAAGACATCATGATATGTTGTAAAAACAAAACTCAAAAGGTGCTGCCAGTATTCTACCATATAGATCCCTCGGAAGTGCGAAATCAGACTGGTAAGTTTGGACAAGCTTTTGATAATCTTATGAGAAGATACCCGGATAAAATAAAAGGCAAGGAGCAGAGTTGGAGGAAAGCACTCCGTGAAGTTGGGTGCATTGCAGGGTTTGTCATCCGAAAATCCAAGTAA 2316 0.3925 MQNESEDIRNIVEHVTHMLDMKELFVANHSVGVESRVEEVIELLRDRQQENPVLGIWDMATTMTLVCSMGLNIEGVSSLGTSLSFETSYTLTRLIIQVVAMSSENQEPQSTFNPYRTTMCDVYISGEPQNPPHPFISHLYVALKGSGVYVLGNHTEPNINDLFLSGAIEGCRVSIIVFTTDYAKSTVCLQELVKIMECHRRSKVQKVVPVFYCLYPSEVSNQSGYFGEVLLDTLERNSTDESKVLSYRTALREASAISPTFLPDIWNERKVIENIVGHVTSLLDATDLFVAQNPVGVHSHVQDLIQLLNNQNEDGVLIMAIWGMAGIGKTTIAKALYNQISHNFEVKKFVPNIKDRIMKNSSRTSSLEEELLLFFQERVTTKTHNADSTRDKWWGLPHIKVLLILDDVRSERELEVLPVTRECFGPGSIIIITTRTKQDRLHEIGVNHIYRVKEMDYNECVELFSWSAFNKATPERSYSGLINYAIEYSDGLPLALVCVGSAVSEKSIQEWENVLDSFKRFPFQDVWQVLKENIDSVGSEEKKIFLELAYLRHLFIGMNRNDISQILQEAVRNAAPRAIKGLEEHSLVWFDEDKLCMNRLLQDIGREMYMKKSSIEPQQRPYDVFLSFRGKETRSKFISHLYASLENAGIYVFKDENGLARGEKLSISLLKAIGESKTSIIILSPNYAFSRWCLQELEDIMICCKNKTQKVLPVFYHIDPSEVRNQTGKFGQAFDNLMRRYPDKIKGKEQSWRKALREVGCIAGFVIRKSK* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1955 771 Gene3D - 616 771 IPR035897 -
Ahy12g1955 771 SUPERFAMILY Toll/Interleukin receptor TIR domain 119 256 IPR035897 -
Ahy12g1955 771 Pfam TIR domain 622 758 IPR000157 GO:0007165
Ahy12g1955 771 Pfam TIR domain 122 279 IPR000157 GO:0007165
Ahy12g1955 771 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 128 620 IPR044974 GO:0006952
Ahy12g1955 771 Gene3D - 117 285 IPR035897 -
Ahy12g1955 771 ProSiteProfiles TIR domain profile. 620 759 IPR000157 GO:0007165
Ahy12g1955 771 SUPERFAMILY Toll/Interleukin receptor TIR domain 613 764 IPR035897 -
Ahy12g1955 771 CDD AAA 301 435 - -
Ahy12g1955 771 ProSiteProfiles TIR domain profile. 118 255 IPR000157 GO:0007165
Ahy12g1955 771 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 630 754 IPR044974 GO:0006952
Ahy12g1955 771 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 288 547 IPR027417 -
Ahy12g1955 771 Gene3D - 455 541 IPR042197 -
Ahy12g1955 771 SMART till_3 621 762 IPR000157 GO:0007165
Ahy12g1955 771 SMART till_3 119 257 IPR000157 GO:0007165
Ahy12g1955 771 Pfam NB-ARC domain 299 537 IPR002182 GO:0043531
Ahy12g1955 771 Gene3D - 286 443 IPR027417 -
Ahy12g1955 771 PRINTS Disease resistance protein signature 395 409 - -
Ahy12g1955 771 PRINTS Disease resistance protein signature 318 333 - -
Ahy12g1955 771 PRINTS Disease resistance protein signature 489 503 - -
Ahy12g1955 771 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 630 754 - -
Ahy12g1955 771 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 128 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1955 Ahy-Chr12 101486558 101489608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1955 295 613 WRKY Transcription Factor Family AT5G45050 30.938 4.86e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1955 - - ahf:112749552 866.685