Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1954 ATGCTGGAAATGAAGGAATTGTTCGTTGCTAATCATCCCGTAGGAGTTGAATCTCGTGTTGAAGAGGTGATTCAACTATTAAAAGACCAGCAACAAGAAAATCCTCTACTACTTGGTATATGGGGCATGGGAGGGTGTGGTAAAACAACCATTGCCAAAGCGGTTTATAATAAAATTTTCCGTGAGTTTGAAGGTAGGTGTTTCCTCCTAAATATAAGAGAAGTTTGGGAACAAGATAATGGAATTCTTCATTTACAACAACAACTTCTTTCTGCTATCTACAAGACAACGAAAATAAAGATTGAAAACACTGAATCTGGAAAATCAATATTAGAGAGAAGACTTGGCCAGAAAAGGATACTTCTTGTACTTGATGTTGTGGACAAATTGGAGCAGCTAAATTCTTTAGCTGCAAGCCGTAAATGGTTCTGTCCCGGTAGCATAATAATCATCACAACAAGAGACGAGCATCTTCTATGTTGTCTTAGAATTGACAAGTTATATAGTATGAAAGAGTTAAATGACAAAGAATCCATTGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAGGTAATTGGGTCACATCTGTTTAATAGGAACGTATATGAATGGAGGAGTGTTTTGAATAAACTCAAAACCATTCCAAACAATGATGTACAGAAGAAGCTTAAAATAAGTTTTGATGGTCTAAGTGATGATAGGGATAGAGAAATATTTCTTGATGTAGCATTTTTCTTTATTGGAATGGACAAAAATGATGTGATTGATATATTAAATGGCTGCGGGCATTCAGCTGAAATTGGAATAAATGTTCTTATGGAACGATGCCTTATTACTGTGGACACTAAGGGAAAACTTGGCATGCATGGTTTGCTGCGAGACATGGGAAGAGAAATTATTCGCGAGAGTTTGCCAATGAAACCTGAGGAACGTAGTAGGTTGTGGAATCCAGAGGAAGTGCTTAATGTATTATCAAAAGACATGGGAACAAAAGCTATTGAGGGACTTGCTTTGAACCTGCCAAAGTCACTGAATCCAACCCACTTAAAGACAGAAGCATTTAAGGAGATGAAGAGACTCAGATTGCTTCAGTTTGCGAATGTGCAACTTGTTGGAGACTTTAAATACCTTTCAACAGATCTTCGATGGTTGTGCTGGCATGAATGTCCTCCAGAATATACAACTGCAAACTTTGATCAAGGAAATTTAGTTGCCATTGACTTCAAATATAGCAAACTCGACCTAGTATGGAAGAAGGGTCAGATGATGGAGAATCTAAAATTTCTCAAGCTTAGTCATTCTCAACACTTGACACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACTTCAGTTTCTCATACCATTGAACATCTCAAACAAGTTCTTCTAATCAATTTGAAAGGGTGTTCAGAGCTTCGTGTACTTCCAAGAAGCATCTACAAGTTGAAATCTCTCAAAACTCTCATTCTATCAGGATGTTCTTTGATTGATAAGTTAGAGGAGGACATAGAACAGATGGAATCATTGGCAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCTCATGCACTACTAAGATTAAAGAGCATTGTGTATATATCTTTGTGCGACTTTGAAGGATTATCGCGCAATGTGTTTCCTTCAATCATTTGGTCATGGACCTCTCCAACAAATAATTTCTCACCCCAAGTGCAAACACTTTTGGACTTGTCAAATCTTGTTTCCTTAATAGTCCCAAATAGAAATTCTCAAGGCCTATCATCCATTATCAGAGACCTTCCACAGGTTCAGAATGTTAGGATGGAGTGTGGCTCACAACTTCAAATAACAGGAGATGTAGCTTCAGATACTTGTAATGTCACAAACTGCAATGAAATGATAGTATCATCATGTGCATCATCAGTTGGTTGTTGCAGTGAAGGTGATGTTACTGAATCAGAAAATTCCTTGAATTCAATTTTAATCCAAATGGGAATGAATTGTTCTGTCACAAAGGCACTCAGAGAGAATATTTTGCAGAAATTTAATGCCAGAGTACCTGGAGAATGTTTGCTTCCTGGCAATAAGAATCCTGATTGGTTAACATTCAGCGGAGAAGGTTCTTCTGTAAATTTCGATGTCCCTCGTGTGAATGGATTCAAGTTAAAAACAATGATGATGTGTGTCTCCTACTCTTCATCTCCAAACATCAAAGCATCTGAAGGCCATATTATTAAAAATCTGTTTATCATAAATCTCACAAAGACCACTCATTATCTCTACGATGGAGATACGTTGGCTTCACTTAGAGAAGAGGAATGGCATAAAGTGATTTCAAACCTTGAAGCTGGAGACAAAGTACAGATTGTTGTTGCTAGGTTAGGAATCATAGTGAAGAAGATAGTAGTTTATCTCATATATGGTGAACCAATTGATATTGTTTGTGGTGATGATATGGTAGCAGATGGAAATGTCACTGTTCATGGTGGAGATGAAAAAAAAAATTCGAAGTCACTTGGAAAACGAAAACTCCAGAGAGTGTGA 2640 0.3727 MLEMKELFVANHPVGVESRVEEVIQLLKDQQQENPLLLGIWGMGGCGKTTIAKAVYNKIFREFEGRCFLLNIREVWEQDNGILHLQQQLLSAIYKTTKIKIENTESGKSILERRLGQKRILLVLDVVDKLEQLNSLAASRKWFCPGSIIIITTRDEHLLCCLRIDKLYSMKELNDKESIELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALEVIGSHLFNRNVYEWRSVLNKLKTIPNNDVQKKLKISFDGLSDDRDREIFLDVAFFFIGMDKNDVIDILNGCGHSAEIGINVLMERCLITVDTKGKLGMHGLLRDMGREIIRESLPMKPEERSRLWNPEEVLNVLSKDMGTKAIEGLALNLPKSLNPTHLKTEAFKEMKRLRLLQFANVQLVGDFKYLSTDLRWLCWHECPPEYTTANFDQGNLVAIDFKYSKLDLVWKKGQMMENLKFLKLSHSQHLTQTPDFSNMPNLEKLILKYCPKLTSVSHTIEHLKQVLLINLKGCSELRVLPRSIYKLKSLKTLILSGCSLIDKLEEDIEQMESLATLMADKTAITQVPHALLRLKSIVYISLCDFEGLSRNVFPSIIWSWTSPTNNFSPQVQTLLDLSNLVSLIVPNRNSQGLSSIIRDLPQVQNVRMECGSQLQITGDVASDTCNVTNCNEMIVSSCASSVGCCSEGDVTESENSLNSILIQMGMNCSVTKALRENILQKFNARVPGECLLPGNKNPDWLTFSGEGSSVNFDVPRVNGFKLKTMMMCVSYSSSPNIKASEGHIIKNLFIINLTKTTHYLYDGDTLASLREEEWHKVISNLEAGDKVQIVVARLGIIVKKIVVYLIYGEPIDIVCGDDMVADGNVTVHGGDEKKNSKSLGKRKLQRV* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1954 879 PRINTS Disease resistance protein signature 37 52 - -
Ahy12g1954 879 PRINTS Disease resistance protein signature 207 221 - -
Ahy12g1954 879 PRINTS Disease resistance protein signature 114 128 - -
Ahy12g1954 879 PRINTS Disease resistance protein signature 517 533 - -
Ahy12g1954 879 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 7 823 - -
Ahy12g1954 879 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 823 IPR044974 GO:0006952
Ahy12g1954 879 CDD AAA 14 156 - -
Ahy12g1954 879 SUPERFAMILY "Winged helix" DNA-binding domain 243 349 IPR036390 -
Ahy12g1954 879 Coils Coil 533 553 - -
Ahy12g1954 879 Gene3D - 172 256 IPR042197 -
Ahy12g1954 879 SUPERFAMILY L domain-like 371 670 - -
Ahy12g1954 879 Gene3D - 3 164 IPR027417 -
Ahy12g1954 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 266 IPR027417 -
Ahy12g1954 879 Gene3D Ribonuclease Inhibitor 367 703 IPR032675 -
Ahy12g1954 879 Pfam NB-ARC domain 17 246 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1954 Ahy-Chr12 101481943 101486281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1954 14 534 WRKY Transcription Factor Family AT5G45050 32.123 3.52e-69 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1954 - - ahf:112727920 1518.44