Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1951 ATGCCTTCCCAAAACCAAGAATATGATGCGTACATTAGTTCCGGATTGCAGTTCCGTCATCCTTTTATTTCAGGTCTCTATGATGCACTCAAAAGTGTTGGACTGCATGTTTTAGCAGACCGCACCGAGCCCAAGACTAATAAACTTTTCTTATCTGGCGCAATCGAACGATGCAGAGTTTCTATCATAGTTTTCACAATAGATTATGCTGAATCAACCTTGTACTTGCAAGAACTCGTGAAAATAATGGAGTGTCATTGGAGGAAAGATCAGAAGGTTGTGCCCGTGTTCTATTGCTTAGATCCCTCCCAAGTATGCAATCTGAGCGGTTATTTTGGGGAGATTTTGTCGCGAACTCTGCAAGGAATCTCAAGGGATGAAAACAGGATGTTGAGTTATGAGACCGCCCTTCGACAAGCTGCTTCCATTTTACCCAGGAATAACAGAGAAGTTAAGAGCCATATAGTTGGACGTGTTACATCCTTGATAGGTTCAACGAAATTATTCATTGCAAAGCATCCGGTGGGAGTAGATTCTCGTGTGCAAGATTTGATTCAACTCTTAAACAATCAGAAAGAAGATGGTGTCCCCATAATAGCAATATGGGGAATGGCGGGAATAGGTAAAACTACAATTGCCAAAGCCCTCTACAATCAAATTAGCCACAATTTCGAGGTGAGGACATTTGTCCCAGACATCCAGGATAGCGTGGCGGATTACACAAGGAGGCGGCTTCATTTCATTTTGAGAGACCCAGATGAAACACAAGCGCAAAACTTTGACTCAACAAGAAAGTTATGGTGGGAAGGACTTCGTTGCTTAAAGGTACTTCTTATAGTTGATAATGTGAGAAGTGACCTAGAGCTGGGGTTTTTGGCAGTAAGTCGTGAAAATTTTGGTCCAGGGAGTATAATAATCATCACGACAAGAACAAAACATGATCGACTTCAAGAGATTGGAGTTAATCATATATATAGAGTGAAAGAAATGGACTACAACGAATGTGTTGAGCTTTTTAGTTGGAGCGCATTCAACAAAGCCACTCCTGAAAGAAGTTTTTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTGCCACTGGCTCTTGTGGGTGTTGGCTCTGCTGTATCTGAAAAAAGTATAGAAGAGTGGGAGAATGTATTGGACAGCTTCAAAAGATTCCCCTTTCAAGATGTATGGCAGGTTTTAAAAGAAAACATAGATTCTGTTGGATCTGAAGAAAAGAAAATATTTCTTGAACTAGCTTATTTGAGTCATCTCTTTATTGGAGTGGACCGAAATGATATATGTCAGATATTACAAGGAGCTGGACATCACGATGCATCGAGAGCAATTAAAGAGATTGAAGAGCATAGTCTTGTGTGGTTTGACAAGGACAAGCTTTGCATGAATCGTTTGCTACAAGACATCGGAAGAGAAATGTATATGAAGGAATCATCGATTGAGCCTCAGCAAAGGCCGTATGATGTATTCTTGAGCTTTCGAGGCAAAGAAACTCGCTCAAAGTTCATCTCACATCTTTATGCATCTCTTGAAAACGCTGGTATCTATGTTTTCAAGGACGAAAACGGGCTAGCAAGAGGGGAAAATCTCTCAATCTCGCTTCTGAAAGCAATTGGAGAGTCTAAAACTTATATCATTATTTTGTCACCAAATTATGCATTTTCAAGATGGTGTTTGCAAGAGTTGGAAGACATCATGATATGTTGTAAAAACAAAACTCAAAAGGTGCTGCCAGTATTCTACCATATAGATCCCTCGGAAGTGCGAAATCAGACTGGTAAGTTTGGACAAGCTTTTGATAATCTTATGAAAAGATACCCGGATAAAATAAAAGGCAAGGAGCAGAGTTGGAGGAAAGCACTCCGTGAAGTTGGATGCATTGCAGGGCTTGTCATCCGAAAATCCAAGAATGAAAGTGGGGATATTAAGAACATTGTTGAACAAGTTACTCATATGCTGGAAATGAAGGAATTGTTCGTTGCTAATCATCCCGTAGGAATTGAATCTCGTGTTGAAGAGGTGATTCAACTATTAAAAGACCAGGAACAAGAAAATCCTCTACTACTTGGTATATGGGGCATGGGAGGGAGTGGTAAAACAACCATTGCCAAAGCGGTTTATAATAAAATTTTCCATGAGTTTGAAGGTCGGTGTTTCCTCCTAAATATAAGAGAAGTTTGGGATCAAGATAATGGAATTCTTCATTTACAACAACAACTTCTTTCTGCTATCTACAAGACAACGAAAATAAAGATTGAAAACACTGAATCTGGAAAATCAATATTAGAGAGAAGACTTGGCCAGAAAAGGATACTTCTTGTACTTGATGATGTGGACAAATTGGAGCAGCTAAATTCTTTAGCTGCAAGTCATAAATGGTTCTGTCCTGGGAGCACAATAATCATCACAACAAGAGATGAACATCTTCTTCGTTGTCTTAGAGTTGACAAGTTATATAGTATGAAAGAGTTAAATGACAAAGAATCCATGGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAGGTAATTGGGTCACATCTGTTTAATAGGAACGTATATGAATGGAGGAGTGTTTTGAATAAACTCAAAACTATTCCAAACAATGATGTACAGAAGAAGCTTAAAATAAGTTTTGATGGTCTAAGTGATGATAGGGATAGAGAAATATTTCTTGATGTAGCATTTTTCTTTATTGGAATGCACAAAAATGATGTAATTGATATATTAAATGGCTGTGGGCATTTTGCTGAAATTGGAATAAAAGTTCTTACGGAACGATGCCTTATTACTGTGGACACTAAGAGGAAACTTGGCATGCATGGTTTGCTGCGAGACATGGGAAGAGAAATTATTCGCGAGAGTTTGCCAATGAAACCTGAGGAACGCAGTAGGTTGTGGAATCCAGATGAAGTGCTTAATGTATTATCAAAAGACATGGGAACAAAAGCTATTGAGGGACTTGCTTTGAACCTGCCAAAGTCATTGGATCCAACTCAGTTAAAGACAGAAGCATTTAAGGAGATGAAGAGACTGAGATTGCTTCAGTTTGCAAATGTGCAACTTGTTGGAGACTTTAAATACCTTTCAACAGATCTTCGATGGTTGTGCTGGCATGAATGTCCTTCAGAATATACAACTGCAAACTTTGATCAAGGAAATTTAGTTGCCATTGACTTCAAATATAGCAAACTCGACCTAGTATGGAAGATGGGTCAGATGATGAAGAATCTAAAATTTCTCAATCTTAGTCATTCTCAACATTTGACACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACTTCGGTTTCTCATACCATTGAACATCTCAAGCAAGTTCTTCTAATCAATTTGAAAGGGTGTTCACGGCTTCGTGTACTTCCAAGAAGCATCTACAAGTTGAGATCTCTCAAAACTCTCATTCTTTCAGGATGTTCATTGATTGATAAGCTAGAGGAAGACATAGAACAGATGGAATCATTGGCAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCTCATGCACTACTAAGATTAAAGAGCATTGTGTATATTTCTTTGTGCGACTTTGAAGGATTATCGCGCAATGTGTTTCCTTCAATCATTTGGTCATGGACCTCTCCAACAAATAATTTCTCACCCCAAGTGCAAACATTTTTGGACTTGTCAAATATTGTTTCCTTAATAGTTCCAAATAGAAAGTCTCAAGGCCTATCATCCATCATCAGAGGGCTTCCACATGTTCAGAATGTTGGGCTGGAGTGTGGCTCACAACTTCAAATAGCAGATGTAGCTTCTGATACTTTTAAGGTCACAAACTGCAATGAAATGATAGTAACATCAAGTGCATCAAATGTCTCAAAAAGGAGTACCTTATCATTAGCTGGTTGTTGCAGCAAACATGACATTATTGAAGCTGAGATTTCCTTGAATTTAATTTTAATCCAAATGGGAATGAGTTGTGCTGTCACAGAGGTACTTAGAGAGAATATTTTTCAGAAATTTAGTGCCAGAGTACCTGGAGATTGTTTGCTTCCTGGCAACAAGAATCCTGATTGGTTAGCATACAGTAGCAAAGATTCTTCTGTAACTTTCCATGTCCCTCAAGTGAATGGGCGTAAGTTAAAGACAGTGTTGTTGTGTATAGTCTATTCTTCTTCCCCAAACAATGTACCGTCAGAAGCCCATATTGTCAAAAATCTGTTTATCATAAATCACACAAAAACCACCCCTTATGTCTATGATGGAGATACACTGGCTTCACTTAAAGATGAGGAGTGGCAGAAGGTAACATCAAACCTTGAAGCTGGTGACAAAGTGCAGATTGTTGTTGTTGCGGGGTTAGGATTCACAGTGAAGAAGATAGCAGTTTATCTCGTATATGCAGATCAACAAGCTGAAGGTATTGTTTGTGCTGACGATATGGTAGCATATGCAAATTTCACTGTTCATGGTGGAGATAACAATAAAAATTTGAACTCACTTGGAAAACGAAAATTCCAGAGAGTATGA 4656 0.3855 MPSQNQEYDAYISSGLQFRHPFISGLYDALKSVGLHVLADRTEPKTNKLFLSGAIERCRVSIIVFTIDYAESTLYLQELVKIMECHWRKDQKVVPVFYCLDPSQVCNLSGYFGEILSRTLQGISRDENRMLSYETALRQAASILPRNNREVKSHIVGRVTSLIGSTKLFIAKHPVGVDSRVQDLIQLLNNQKEDGVPIIAIWGMAGIGKTTIAKALYNQISHNFEVRTFVPDIQDSVADYTRRRLHFILRDPDETQAQNFDSTRKLWWEGLRCLKVLLIVDNVRSDLELGFLAVSRENFGPGSIIIITTRTKHDRLQEIGVNHIYRVKEMDYNECVELFSWSAFNKATPERSFSGLINYAIEYSDGLPLALVGVGSAVSEKSIEEWENVLDSFKRFPFQDVWQVLKENIDSVGSEEKKIFLELAYLSHLFIGVDRNDICQILQGAGHHDASRAIKEIEEHSLVWFDKDKLCMNRLLQDIGREMYMKESSIEPQQRPYDVFLSFRGKETRSKFISHLYASLENAGIYVFKDENGLARGENLSISLLKAIGESKTYIIILSPNYAFSRWCLQELEDIMICCKNKTQKVLPVFYHIDPSEVRNQTGKFGQAFDNLMKRYPDKIKGKEQSWRKALREVGCIAGLVIRKSKNESGDIKNIVEQVTHMLEMKELFVANHPVGIESRVEEVIQLLKDQEQENPLLLGIWGMGGSGKTTIAKAVYNKIFHEFEGRCFLLNIREVWDQDNGILHLQQQLLSAIYKTTKIKIENTESGKSILERRLGQKRILLVLDDVDKLEQLNSLAASHKWFCPGSTIIITTRDEHLLRCLRVDKLYSMKELNDKESMELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALEVIGSHLFNRNVYEWRSVLNKLKTIPNNDVQKKLKISFDGLSDDRDREIFLDVAFFFIGMHKNDVIDILNGCGHFAEIGIKVLTERCLITVDTKRKLGMHGLLRDMGREIIRESLPMKPEERSRLWNPDEVLNVLSKDMGTKAIEGLALNLPKSLDPTQLKTEAFKEMKRLRLLQFANVQLVGDFKYLSTDLRWLCWHECPSEYTTANFDQGNLVAIDFKYSKLDLVWKMGQMMKNLKFLNLSHSQHLTQTPDFSNMPNLEKLILKYCPKLTSVSHTIEHLKQVLLINLKGCSRLRVLPRSIYKLRSLKTLILSGCSLIDKLEEDIEQMESLATLMADKTAITQVPHALLRLKSIVYISLCDFEGLSRNVFPSIIWSWTSPTNNFSPQVQTFLDLSNIVSLIVPNRKSQGLSSIIRGLPHVQNVGLECGSQLQIADVASDTFKVTNCNEMIVTSSASNVSKRSTLSLAGCCSKHDIIEAEISLNLILIQMGMSCAVTEVLRENIFQKFSARVPGDCLLPGNKNPDWLAYSSKDSSVTFHVPQVNGRKLKTVLLCIVYSSSPNNVPSEAHIVKNLFIINHTKTTPYVYDGDTLASLKDEEWQKVTSNLEAGDKVQIVVVAGLGFTVKKIAVYLVYADQQAEGIVCADDMVAYANFTVHGGDNNKNLNSLGKRKFQRV* 1552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1951 1551 SUPERFAMILY L domain-like 1034 1345 - -
Ahy12g1951 1551 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 495 IPR044974 GO:0006952
Ahy12g1951 1551 SUPERFAMILY Toll/Interleukin receptor TIR domain 488 639 IPR035897 -
Ahy12g1951 1551 CDD AAA 675 817 - -
Ahy12g1951 1551 SMART AAA_5 195 331 IPR003593 -
Ahy12g1951 1551 SMART AAA_5 695 830 IPR003593 -
Ahy12g1951 1551 SMART till_3 7 143 IPR000157 GO:0007165
Ahy12g1951 1551 SMART till_3 496 637 IPR000157 GO:0007165
Ahy12g1951 1551 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 18 495 - -
Ahy12g1951 1551 Gene3D - 491 667 IPR035897 -
Ahy12g1951 1551 Pfam TIR domain 8 162 IPR000157 GO:0007165
Ahy12g1951 1551 Pfam TIR domain 497 663 IPR000157 GO:0007165
Ahy12g1951 1551 Gene3D - 2 164 IPR035897 -
Ahy12g1951 1551 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 506 1508 IPR044974 GO:0006952
Ahy12g1951 1551 Gene3D - 833 917 IPR042197 -
Ahy12g1951 1551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 422 IPR027417 -
Ahy12g1951 1551 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 506 1508 - -
Ahy12g1951 1551 Gene3D - 668 828 IPR027417 -
Ahy12g1951 1551 Coils Coil 1194 1214 - -
Ahy12g1951 1551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 661 927 IPR027417 -
Ahy12g1951 1551 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 119 IPR035897 -
Ahy12g1951 1551 ProSiteProfiles TIR domain profile. 495 663 IPR000157 GO:0007165
Ahy12g1951 1551 ProSiteProfiles TIR domain profile. 6 131 IPR000157 GO:0007165
Ahy12g1951 1551 SUPERFAMILY "Winged helix" DNA-binding domain 904 1010 IPR036390 -
Ahy12g1951 1551 Pfam NB-ARC domain 678 907 IPR002182 GO:0043531
Ahy12g1951 1551 Pfam NB-ARC domain 179 412 IPR002182 GO:0043531
Ahy12g1951 1551 Gene3D Ribonuclease Inhibitor 1023 1242 IPR032675 -
Ahy12g1951 1551 PRINTS Disease resistance protein signature 868 882 - -
Ahy12g1951 1551 PRINTS Disease resistance protein signature 698 713 - -
Ahy12g1951 1551 PRINTS Disease resistance protein signature 775 789 - -
Ahy12g1951 1551 PRINTS Disease resistance protein signature 1178 1194 - -
Ahy12g1951 1551 Gene3D - 165 317 IPR027417 -
Ahy12g1951 1551 Gene3D - 330 416 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1951 Ahy-Chr12 101437155 101445673 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1951 3 495 WRKY Transcription Factor Family AT4G12020 24.603 1.40e-23 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1951 - - ahf:112727920 2282.29