Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1949 ATGGACAAAGACGAAGTAATTGATATATTGAATGGCTGTGGATATTCTACTGAAATTGGGATCAGTGTTCTCAGGGAACCATCTCTTGTAACAATTGACTCTAAGAACAAACTTAGAATGCATTATTTGTTGCGAGATATGGGAAGAGAAATCATTCGTGAGAATCTACCTTTACCCGAAGAACGCAGTAGATTATGGAATCCAGAAGAAGTGCTTGATGTCTTATCAAAAGACATGGGAACAAAAGCTATTCAGGGACTTGCTTTGAAGTTGTCAAGGATGAAACCAATTCATTTGAAGACCAATGCTTTTAGGAAGATGAAGAGACTAAGATTGCTTCAACTTGGTGGTGTACAACTCGATGGAGACTTTAAATACCTCTCAACCGATCTTCGATGGTTGTCCTGGCATGGATGTTCTTCAGAATATACAACTATAGGTTTTGATCAAGGAAACTTAGTTGCCATTGACTTCAGATATAGCAATCTCCAGCTAGTATGGAAGAAGAGGCAGGTACGATTATTTATGATGTAA 534 0.3801 MDKDEVIDILNGCGYSTEIGISVLREPSLVTIDSKNKLRMHYLLRDMGREIIRENLPLPEERSRLWNPEEVLDVLSKDMGTKAIQGLALKLSRMKPIHLKTNAFRKMKRLRLLQLGGVQLDGDFKYLSTDLRWLSWHGCSSEYTTIGFDQGNLVAIDFRYSNLQLVWKKRQVRLFMM* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1949 177 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 163 IPR044974 GO:0006952
Ahy12g1949 177 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 4 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1949 Ahy-Chr12 101429121 101429843 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1949 1 174 WRKY Transcription Factor Family AT4G12020 34.973 1.14e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1949 - - aip:110269276 348.206