Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1946 ATGGACTACAACGAATGTGTTGAGCTTTTTAGTCGGAGCGCATTCAACAAAGCCACTCCTGAAAGAAGTTTTTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTGCCACTGGCTCTTGTGGGTGTTGGCTCTGCTGTATCTGAAAAAAGTATAGAAGAGTGGGAGAATGTGTTGGACAGCTTCAAAAGATTCCCCTCTCTAGATGTATGGCAGGTTTTAAAAGAAAACATAGATTCTGTTGGATATGAAGAAAAGAAAATATTTCTTGAACTAGCTTATTTGAGACATATCTTTATTGGAATGAATCGAAATGATATAAGTCAGATATTACAAGAAGCTGGACGTAATGCCGCACCAAGAGAAATTAAAGGACTTGAAGAGCATAGTCTTGTGTGGTTTGACGAGGACAAGCTTTGCATGAATCGTTTGCTACAAGACATCGGAAGAGAAATGTATATGAAGGAATCATTGATTGAGCCTCAGCAAAGGCCATATGATGTATTCTTGAGCTTTCGAGGCAAAGAAACTCGCTCAAAGTTCATCTCACATCTTTATGCATCTCTTGAAAATGCTGGTATCTATGTTTTCAAGGATGAAGACGGGCTAGCAAGAGGGGAAAATCTCTCAATCTCGCTTCTGAAAGCAATTGGAGAGTCTAAAACTTCTATCATTATTTTGTCACCAAATTATGCATTTTCAAGATGGTGTTTGCAAGAGTTGGAAGACATCATGATATGTTGTAGAAACAAAACTCAAAAGGTGCTGCCAGTATTCTACCATATAGATCCCTCAGAAGTGCGAAATCAAACTGGTAAGTTTGGACAAGCTTTTGATAACCTTATGAAAAGATATCCGGATAAAATAAAAGGCAAGGAGCAGAGTTGGAGGAAAGCACTCCGTGAAGTCGGGTGTATTGCGGGGTTTGTCATCCGAAAATCCAGGAATGAAAGTGAGGATATTAAGAACATTGTTGAACATATTACTCATATGCTGGACATGAAGGAACTGTTTGTTGCAAATCATCCGGTAGGAGTTGAATCTCGTGTTGAAGAGGTGATTGAAATGTTAAAAGACCAGCAGCAAGAAAATCCTCTACTACTTGGTATATGGGGCATGGGAGGGAGTGGTAAAACAACCATTAGCAAAGCGATTTATAATAAACTTTTCCGCGAGTTTGAAGGTCGGTGCTTCCTCCTAAATATAAGAGAAGTTTGGGATCAAGATAATGGAATTCTTTATTTACAACAGCAACTTCTTTCTTCTATTTTTAGGACAACGAAAATAAAGGTAGAAAACATTGAATCTGGAAAGTCAATATTGGAAAAAAGACTTGGCCAGAAAAAGATTCTTCTTGTACTTGATGATGTGGACAAATTGGAGCAGCTAAATTCTTTAGCTGCAAGCCGTGAATGGTTCTGTCCCGGTAGCATAATAATCATCACAACAAGAGACGAGCATCTTCTACGTTGTCTTAGAATTGACAAGTTATATAGTATGAAAGAGTTAAATGACAAAGAATCCATTGAACTTTTTAGCTGGCATGCATTCAAAGAACCGTGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAGGTAATTGGGTCACATCTGTTTAATAGGAAAGTATATGAATGGAGGAGTGTTTTGAATAAACTCAAAACTATTCCAAACAATGATGTACAGAAGAAGCTTAAAATAAGTTTTGATGGTCTAAGTGATGATAGGGATAGAGAAATATTTCTTGATGTAGCATTTTTCTTTATTGGAATGGACAAAAATGATGTGATTGATATATTAAATGGCTGCGGGCATTCAGCTGAAATTGGAACGAATGTTCTTATGGAACGATGCCTTATTACTGTGGACACCAAGGGAAAACTTGGCATGCATGGTTTGCTGCGAGACATGGGAAGAGAAGTTATTCGCGAGAGTTTGCCGATGAAACCTGAGGAACGTAGTAGGTTGCGGAATCCAGTTGAGGTGCTTAATGTATTATCAAAAGACATGGGAACAAAAGCTATTGAGGGACTTGCTTTGAACCTGTCAAAGTCACTGAATCCAACCCACTTAAAGACAGAAGCATTTAAGGAGATGAAGAGACTAAGATTGCTTCAGTTTGCGAATGTGCAACTTGTTGGAGACTTTAAATACCTTTCAACAGATCTTCGATGGTTGTGCTGGCATGAATGTCCTTCAGAATATACAACTGCAAACTTTTATCAAGGAAATTTAGTTGCCATTGACTTCAAATATAGCAAACTCGACCTAGTATGGAAGAAGGGTCAGATGATGAAGAATCTAAAAATTCTCAATCTTAGTCATTCTCAACACTTGACACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACTTCGGTTTCTCATAGCATTGAACATCTCAAGCAAGTTTTTCTAATCAATTTGAAAGGGTGTTCAGGGCTTCGTGTACTTCCAAGAAGCATCTACAAGTTGAAATCTCTCAAAACTCTCATTCTTTCAGGATGTTCATTGATTGATAAGCTAGAGGAGGACATAGAACAGATGGAATCATTGGCAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCTCATGCACTACTAAGATTAAAGAGCATTGTGTATATTTCTTTGTGCGACTTTGAAGGATTATCGCGCAATGTGTTTCCTTCAATCATTTGGTCATGGACCTCTCCAACAAATAATTTCTCACCCCAAGTGCAAACATTTTTGGACTTGTCAAATATTGTTTCCTTAATAGTTCCAAATAGAAATTCTCAAGGCCTATCATCCATCATCAGAGGGCTTCCACTGGTTCAGAATGTTGGGCTGGAGTGTGGCTCACAACTTCAAATAGCAGATGTAGCTTCTGATACTTTTAAGGTCACAAACTGCAATGAAATGATAGTAACATCAAGTGCATCAAATGTCTCAAAAAGGAGTACCTTATTATTAGCTGGTTGTTGCAGCAAACATGACATTATTGAAGCTGAAATTTCCTTGAATTTAATTTTAATCCAAATGGGAATGAGTTGTGCTGTCACAGAGGTACTTAGAGAGAATATTTTTCAGAAATTTAGTGCCAGAGTACCTCGAGATTGTTTGCTTCCTGGCAACAAGAATCCTGATTGGTTAGCATACAGTAGCGAAGATTCTTCTGTAACTTTCCATTTCCCTCAAGTGAATGGGCGTAAGTTAAAGACAGTGTTGTTGTGTATAGTCTATTCTTCTTCCCCAAACAATGTACCGTCAGAAGCCCATATTTTCAAAAATCTGTTTATCATAAATCACACAAAAACCACCCCTTATGTCTATGATGGAGATACACTGGCTTCACTTAAAGATGAGGAGTGGCAGAAGGTAACATCAATCCTTGAAGCCGGTGACAAAGTGCAGATTGTTGTTGTTGCGGGGTTAGGATTCACAGTGAAGAAGACAGTGGTTTATCTCGTATATGCAGATCAACAAGCTGAAGGTATTGTTTGTGCTGATGATATGGTAGCATATGCAAATTTCACTGTTCATGGTGGAGATAACAATAAAAATTTGAACTCGCTTGGAAAACGAAAATTCCAGAGAGTATGA 3669 0.3794 MDYNECVELFSRSAFNKATPERSFSGLINYAIEYSDGLPLALVGVGSAVSEKSIEEWENVLDSFKRFPSLDVWQVLKENIDSVGYEEKKIFLELAYLRHIFIGMNRNDISQILQEAGRNAAPREIKGLEEHSLVWFDEDKLCMNRLLQDIGREMYMKESLIEPQQRPYDVFLSFRGKETRSKFISHLYASLENAGIYVFKDEDGLARGENLSISLLKAIGESKTSIIILSPNYAFSRWCLQELEDIMICCRNKTQKVLPVFYHIDPSEVRNQTGKFGQAFDNLMKRYPDKIKGKEQSWRKALREVGCIAGFVIRKSRNESEDIKNIVEHITHMLDMKELFVANHPVGVESRVEEVIEMLKDQQQENPLLLGIWGMGGSGKTTISKAIYNKLFREFEGRCFLLNIREVWDQDNGILYLQQQLLSSIFRTTKIKVENIESGKSILEKRLGQKKILLVLDDVDKLEQLNSLAASREWFCPGSIIIITTRDEHLLRCLRIDKLYSMKELNDKESIELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALEVIGSHLFNRKVYEWRSVLNKLKTIPNNDVQKKLKISFDGLSDDRDREIFLDVAFFFIGMDKNDVIDILNGCGHSAEIGTNVLMERCLITVDTKGKLGMHGLLRDMGREVIRESLPMKPEERSRLRNPVEVLNVLSKDMGTKAIEGLALNLSKSLNPTHLKTEAFKEMKRLRLLQFANVQLVGDFKYLSTDLRWLCWHECPSEYTTANFYQGNLVAIDFKYSKLDLVWKKGQMMKNLKILNLSHSQHLTQTPDFSNMPNLEKLILKYCPKLTSVSHSIEHLKQVFLINLKGCSGLRVLPRSIYKLKSLKTLILSGCSLIDKLEEDIEQMESLATLMADKTAITQVPHALLRLKSIVYISLCDFEGLSRNVFPSIIWSWTSPTNNFSPQVQTFLDLSNIVSLIVPNRNSQGLSSIIRGLPLVQNVGLECGSQLQIADVASDTFKVTNCNEMIVTSSASNVSKRSTLLLAGCCSKHDIIEAEISLNLILIQMGMSCAVTEVLRENIFQKFSARVPRDCLLPGNKNPDWLAYSSEDSSVTFHFPQVNGRKLKTVLLCIVYSSSPNNVPSEAHIFKNLFIINHTKTTPYVYDGDTLASLKDEEWQKVTSILEAGDKVQIVVVAGLGFTVKKTVVYLVYADQQAEGIVCADDMVAYANFTVHGGDNNKNLNSLGKRKFQRV* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1946 1222 SUPERFAMILY L domain-like 703 975 - -
Ahy12g1946 1222 Gene3D - 332 497 IPR027417 -
Ahy12g1946 1222 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 177 1179 IPR044974 GO:0006952
Ahy12g1946 1222 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 166 IPR044974 GO:0006952
Ahy12g1946 1222 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 177 1179 - -
Ahy12g1946 1222 Pfam TIR domain 168 333 IPR000157 GO:0007165
Ahy12g1946 1222 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 2 166 - -
Ahy12g1946 1222 Gene3D - 504 588 IPR042197 -
Ahy12g1946 1222 CDD AAA 346 488 - -
Ahy12g1946 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 333 598 IPR027417 -
Ahy12g1946 1222 SUPERFAMILY "Winged helix" DNA-binding domain 575 660 IPR036390 -
Ahy12g1946 1222 Pfam NB-ARC domain 349 578 IPR002182 GO:0043531
Ahy12g1946 1222 Pfam NB-ARC domain 4 70 IPR002182 GO:0043531
Ahy12g1946 1222 SMART AAA_5 366 501 IPR003593 -
Ahy12g1946 1222 SUPERFAMILY Toll/Interleukin receptor TIR domain 163 310 IPR035897 -
Ahy12g1946 1222 Gene3D - 165 331 IPR035897 -
Ahy12g1946 1222 Gene3D Ribonuclease Inhibitor 684 917 IPR032675 -
Ahy12g1946 1222 PRINTS Disease resistance protein signature 446 460 - -
Ahy12g1946 1222 PRINTS Disease resistance protein signature 849 865 - -
Ahy12g1946 1222 PRINTS Disease resistance protein signature 369 384 - -
Ahy12g1946 1222 PRINTS Disease resistance protein signature 539 553 - -
Ahy12g1946 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 93 IPR027417 -
Ahy12g1946 1222 SMART till_3 167 308 IPR000157 GO:0007165
Ahy12g1946 1222 Gene3D - 1 86 IPR042197 -
Ahy12g1946 1222 ProSiteProfiles TIR domain profile. 166 334 IPR000157 GO:0007165
Ahy12g1946 1222 Coils Coil 865 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1946 Ahy-Chr12 101411390 101418192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1946 166 922 WRKY Transcription Factor Family AT4G12020 29.374 1.17e-70 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1946 - - ahf:112727920 2417.5