Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1945 ATGTCTTCCCAAAACCAGGAACCCCAATTCATATATGATGCTTACATTAGTTTCGGACTGCAGCTCCTTCATCCTTTTATTTCAGGTCTCTATGATGCACTCAAAAGTGTTGGACTGCATGTTTTAGCAGACCGCACCGAGCCCAAGACTAATATATCTGACGCAATCGAACGATGCAGAGTTTCTATCATAGTTTTCACAATAGCTTATGCTGAATCAACCTTGTACTTGCAAGAACTCGTGAAAATAATGGAGTGTCATCGGAGGAAAGTTCAGAAGGTTGTGCCCGTGTTCTATTGCTTGGATCTCTCCGAAGTATGCAATCTGAGCGGTCATTTTGGGGAGATTTTGTCGCGAACTCTGCAAGGAATCTCAAGGGATGAAAACAGGATGTTGAGTTATGGGACCGCCCTTCGACAAGCTGCTTCCATTTTACCCAGGTTTCTTCCAGATATCTGGAATAACAGAGAAGTTATGAGCCATATAGTTGGACATGTTACATCCTTGATAGATTCAACAAAATTATTCATTGCAAAGCATCCGGTGGGAGTTGACTCTCGTGTGCAAGATTTGATTCAACTCTTAAACAATCAGAAAGCAGATGGTGTCCTCATAATAGCAATATGGGGAATGGCGGGAATAGGTAAAACTACAATTGCCAAAGCCCTCTACAACCAAATTAGGCACAATTTCGAGGTGAGGAGATTTGTCCCAGACATCCAGGATGGGAAGGGGGATTATCCAATATGGTTGGCTTCCAAATTTAAAGAAGAGAGGCTTCTTTTGTTTTTGAAAGACCAAGTTAAAACAAAAGCGCAAAACTTCGACTCAACAAGAAATATATGGTGGGAAGGACTTCGTTGCTTAAAGGTACTTCTTATACTTGATAATATGAGAAGTGAAAGAGAGCTGGAGGTTTTGCCAGTAATTCCTGAATGCTTTGGTCCAGGGAGTATAATAATCATCACGACAAGGACTAAACACGATCGACTTCATGAGATTGGAGTTAATCATATATATAGAGTGAAAGAAATGGACTACAACGAATGTGTTGAGCTTTTTAGTTGGAGCGCATTCAACAAAGCCACTCCTGAAAGAAGTTTTTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTGCCACTGGCTCTTGTGTGTGTTGGCTCTGCTGTATCTGAAAAAAGTATACAAGAGTGGGAGAATGTATTGGACAGCTTCAAAAGATTACCCTTTCAAGATGTATGGCAGGTTTTAAAAGAAAACATAGATTCTGTTGGATCTGAAGAAAAGAAAATATTCCTTGAACTAGCTTATTTGAGACATCTCTTTATTGGAATGAATCGAAATGATATAAGTCAGATATTACAAGAAGCTGGACATAATGCTGCACCAAGAGCAATTAAAGGACTTGAAGAGCATAGTCTTGTGTGGTTTGATGAGGACAAGCTTTGCATGAATCGTTTGCTACAAGACATCGGAAGAGAAATGTATATGAAGCAATCATCGATTGAGCCTCAGCAAAGGCCATATGATGTATTCTTGAGCTTTCGAGGCAAAGAAACTCGCTCAAAGTTCATCTCACATCTTTATGCATCTCTTGAAAATGCCGGTATCTATGTTTTCAAGGATGAAAACGGGCTAGCAAGAGGGGAAAAACTCTCAATCTCGCTTCTGAAAGCAATTGGAGAGTCTAAAACTTCTATCATTATTCTGTCACCAAATTATGCATTTTCAAGATGGTGTTTGCAAGAGTTGGAAGACATCATGATATGTTGTAAAAACAAAACTCAAAAGGTGCTGCCAGTATTCTACCATATAGATCCCTCGGAAGTGCGAAATCAGACTGGTAAGTTTGGACAAGCTTTTGATAATCTTATGAAAAGATGCCCGGATAAAATAAAAGGCAAGGAGCAGAGTTGGAGGAAAGCACTCCGTGAAGTTGGGTGCATTGCAGGGAATGAAAGTGAGGATATTAAGAACATTGTTGAACAAGTTACTCATATGCTGGAAATGAAGGAATTGTTCGTTGCTAATCATCCTGTAGGAGTTGAATCTCGTGTTGAAGAGGTGATTCAACTATTAAAAGACCAGCACCAAGAAAATCCTCTACTACTTGGTATATGGGGCATGGGAGGGTGTGGTAAAACAACCATTGCCAAAGCGGTTTATAATAAAATTTTCCGTGAGTTTGAAGGTCGGTGTTTCCTCCTAAATATAAGAGAAGTTTGGGATCAAGATAATGGAATTCTTCATTTACAACAACAACTTCTTTCTGCTATCTACAAGACAACGAAAATAAAGATTGAAAACACTGAATCTGGAAAATCAATATTAGAGAGAAGACTTGGCCAGAAAAGGATACTTCTTGTACTTGATGATGTGGACAAATTGGAGCAGCTAAATTCTTTAGCTGCAAGTCATAAATGGTTCTGTCCTGGGAGCACAATAATCATCACAACAAGAGATGAACATCTTCTTCGTTGTCTTAGAGTTGATAAGTTATATAGTATGAAAGAGTTAAATGACAAAGAATCCATGGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAGGTAATTGGGTCACATCTGTTTAATAGGAAAGTATGTGAATGGAAGAGTGTTTTGAATAAACTCAAAACTATTCCAAACAACGATGTACAGAAGAAGCTTAAAATAAGTTTTGATGGTCTAAGTGATGATAGGAATAGAGAAATATTTCTTGATGTAGCATTTTTCTTTATTGGAATGGACAAAAATGATGTAACTGATATATTAAATGGCTGCGGGCATTCAGCTGACATTGGAATAAATATTCTTATGGAACGATGCCTTATTACTGTGGACACTAAGGGAAAACTTGGCATGCATGGTTTGCTGCGAGACATGGGAAGAGAAATTATTCGCGAGAGTTTGCCAATGAAACCTGAGGAACGTAGTAGGTTGTGGAATCCAGATGAAGTGCTTAATGTATTATCAAAAGACATGGGAACAAAAGCTATTGAGGGACTTGCTTTGAACCTGCCAAAGTCATTGAATCCAACTCAGTTAAAGGCAGAAGCATTTAAGGAGATGAAGAGACTGAGATTGCTTCAGTTTACAAATGTGCAACTTGTTGGAGACTTTAAATACCTTTCAACGGATCTTCGATGGTTGTGCTGGCATGAATGTCCTTCAGAATATACAACTGCAAACTTTGATCAAGGAAATTTAGTTGCTATTGACTTCAAATATAGCAAACTCGACCTTGTATGGAAGAAGGGTCAGATGATGAAGAATCTAAAAATTCTCAATCTTAGTCATTCTCAACACTTGACACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACTTTGGTTTCTCATACCATTGAACATCTCAAGCAAGTTCTTCTAATCAATTTGAAAGGGTGTTCGGGGCTTCGTGTACTTCCAAGAAGTATCTACAAGTTGAAATCTCTCAAAACTCTCATTCTTTCAGGATGTTCATTGATTGATAAATTAGAGGAAGACATAGAACAAATGGAATCATTGACAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCTCATGCACTTCTAAGATTAAAAAGCATTGTGTATGTTTCTCTGTGTGACTTTAAAGGATTATCGCGCAATGTGTTTCCTTCAATCATTTGGTCATGGACCTCTCCAACAAATAACTTCTCACCCCAAGTGCAAACATTTTTGGACTTGTCAAATCTTGTTTCCTTAATAGTACCAAATAGCAACTCTCAAGGCCTATCATCCATCATCAGAGAGCTTCCACAGGTCCAGAATGTTAGGCTGGAATGTGGCTCACAACTTCAAATTATAGGAGATGTAGTTTCTAATACTTTTGATGTCACAAACTGCAATGAAATGAAAGTAACATCAAGTGCTTCAAATATCTCAAAAGGGAGTAGCTCATCATTAATTGGTTACTGCAGTGAAGATGACATTATTGAATCAGAAAATTCCTTGAATTCAATTTTAATTCAAATGGGAATGAGTTGTTCAGTCACAGAGTTACTTAGGGAAAATATTTTGCAGAAGTTTAATGCAAGAGTACCTGGAGATTGCTTGCTTCCTGGCAACAAGAATCCTGATTGGTTAACATTCAGTTGTGAAGGTTCTTTTGTAATTTTTGACATCCCTCAGGTGAATGGGCATAAGTTAAAGTCAGTGATGTTGTGTATCATCTATTCTTCTTCCTCAAACATTGTACCTTTAGAAGGCCCTATCATTAAAAATTTGTGTATCATAAATCATACAAAGACCACCCCTTTTCTCTACGATGGAGATACACTGGCTTCACTTAGAGATGATGAATGGCAGAAAGTAATAGCGAACCTTGAAGCTGGTGACAAAGTGCAGATTGTTGTTTCTTCCGGATTAGGATTCACTGTGAAGAAGACAGCAGTTTATCTCATATATGCAGAGCAACAAGCTGAAGGTATTGTTTGTGGTGATGATATGGTAGCAGATGGAAATATCATTGTTCATGATGGAGAAGAAAATGATTTACTTCAAGGAGTAAACAAGAATTTCTCAAAAAAAAATTTGAAGTCACATACAAAACGAAAATTCAAAGAGTATGATGATACCAATCATTAA 4734 0.3775 MSSQNQEPQFIYDAYISFGLQLLHPFISGLYDALKSVGLHVLADRTEPKTNISDAIERCRVSIIVFTIAYAESTLYLQELVKIMECHRRKVQKVVPVFYCLDLSEVCNLSGHFGEILSRTLQGISRDENRMLSYGTALRQAASILPRFLPDIWNNREVMSHIVGHVTSLIDSTKLFIAKHPVGVDSRVQDLIQLLNNQKADGVLIIAIWGMAGIGKTTIAKALYNQIRHNFEVRRFVPDIQDGKGDYPIWLASKFKEERLLLFLKDQVKTKAQNFDSTRNIWWEGLRCLKVLLILDNMRSERELEVLPVIPECFGPGSIIIITTRTKHDRLHEIGVNHIYRVKEMDYNECVELFSWSAFNKATPERSFSGLINYAIEYSDGLPLALVCVGSAVSEKSIQEWENVLDSFKRLPFQDVWQVLKENIDSVGSEEKKIFLELAYLRHLFIGMNRNDISQILQEAGHNAAPRAIKGLEEHSLVWFDEDKLCMNRLLQDIGREMYMKQSSIEPQQRPYDVFLSFRGKETRSKFISHLYASLENAGIYVFKDENGLARGEKLSISLLKAIGESKTSIIILSPNYAFSRWCLQELEDIMICCKNKTQKVLPVFYHIDPSEVRNQTGKFGQAFDNLMKRCPDKIKGKEQSWRKALREVGCIAGNESEDIKNIVEQVTHMLEMKELFVANHPVGVESRVEEVIQLLKDQHQENPLLLGIWGMGGCGKTTIAKAVYNKIFREFEGRCFLLNIREVWDQDNGILHLQQQLLSAIYKTTKIKIENTESGKSILERRLGQKRILLVLDDVDKLEQLNSLAASHKWFCPGSTIIITTRDEHLLRCLRVDKLYSMKELNDKESMELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALEVIGSHLFNRKVCEWKSVLNKLKTIPNNDVQKKLKISFDGLSDDRNREIFLDVAFFFIGMDKNDVTDILNGCGHSADIGINILMERCLITVDTKGKLGMHGLLRDMGREIIRESLPMKPEERSRLWNPDEVLNVLSKDMGTKAIEGLALNLPKSLNPTQLKAEAFKEMKRLRLLQFTNVQLVGDFKYLSTDLRWLCWHECPSEYTTANFDQGNLVAIDFKYSKLDLVWKKGQMMKNLKILNLSHSQHLTQTPDFSNMPNLEKLILKYCPKLTLVSHTIEHLKQVLLINLKGCSGLRVLPRSIYKLKSLKTLILSGCSLIDKLEEDIEQMESLTTLMADKTAITQVPHALLRLKSIVYVSLCDFKGLSRNVFPSIIWSWTSPTNNFSPQVQTFLDLSNLVSLIVPNSNSQGLSSIIRELPQVQNVRLECGSQLQIIGDVVSNTFDVTNCNEMKVTSSASNISKGSSSSLIGYCSEDDIIESENSLNSILIQMGMSCSVTELLRENILQKFNARVPGDCLLPGNKNPDWLTFSCEGSFVIFDIPQVNGHKLKSVMLCIIYSSSSNIVPLEGPIIKNLCIINHTKTTPFLYDGDTLASLRDDEWQKVIANLEAGDKVQIVVSSGLGFTVKKTAVYLIYAEQQAEGIVCGDDMVADGNIIVHDGEENDLLQGVNKNFSKKNLKSHTKRKFKEYDDTNH* 1578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1945 1577 SMART till_3 11 144 IPR000157 GO:0007165
Ahy12g1945 1577 SMART till_3 511 652 IPR000157 GO:0007165
Ahy12g1945 1577 Pfam TIR domain 512 670 IPR000157 GO:0007165
Ahy12g1945 1577 Pfam TIR domain 12 134 IPR000157 GO:0007165
Ahy12g1945 1577 CDD AAA 683 825 - -
Ahy12g1945 1577 Pfam NB-ARC domain 686 915 IPR002182 GO:0043531
Ahy12g1945 1577 Pfam NB-ARC domain 186 427 IPR002182 GO:0043531
Ahy12g1945 1577 ProSiteProfiles TIR domain profile. 510 671 IPR000157 GO:0007165
Ahy12g1945 1577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 437 IPR027417 -
Ahy12g1945 1577 SUPERFAMILY Toll/Interleukin receptor TIR domain 503 652 IPR035897 -
Ahy12g1945 1577 Gene3D Ribonuclease Inhibitor 1038 1369 IPR032675 -
Ahy12g1945 1577 SUPERFAMILY L domain-like 982 1316 - -
Ahy12g1945 1577 ProSiteProfiles TIR domain profile. 10 132 IPR000157 GO:0007165
Ahy12g1945 1577 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 521 1515 - -
Ahy12g1945 1577 Gene3D - 11 172 IPR035897 -
Ahy12g1945 1577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 521 1515 IPR044974 GO:0006952
Ahy12g1945 1577 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 22 510 - -
Ahy12g1945 1577 Gene3D - 841 925 IPR042197 -
Ahy12g1945 1577 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 120 IPR035897 -
Ahy12g1945 1577 Gene3D - 668 835 IPR027417 -
Ahy12g1945 1577 Gene3D - 173 332 IPR027417 -
Ahy12g1945 1577 PRINTS Disease resistance protein signature 783 797 - -
Ahy12g1945 1577 PRINTS Disease resistance protein signature 876 890 - -
Ahy12g1945 1577 PRINTS Disease resistance protein signature 706 721 - -
Ahy12g1945 1577 PRINTS Disease resistance protein signature 1186 1202 - -
Ahy12g1945 1577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 669 935 IPR027417 -
Ahy12g1945 1577 Gene3D - 509 667 IPR035897 -
Ahy12g1945 1577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 510 IPR044974 GO:0006952
Ahy12g1945 1577 Coils Coil 1202 1222 - -
Ahy12g1945 1577 Gene3D - 345 431 IPR042197 -
Ahy12g1945 1577 SMART AAA_5 202 350 IPR003593 -
Ahy12g1945 1577 SMART AAA_5 703 838 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1945 Ahy-Chr12 101366802 101376754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1945 5 510 WRKY Transcription Factor Family AT4G12020 25.336 3.66e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1945 - - ahf:112727920 2135.15