Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1943 ATGGGAGGGACGCCTGCATCTGCATATGGCGTCGGCATGCCGGTCGATCCTCCAGCACAGCAGCGCCAGAGGCCCGCCAGAGTGAGACGGGCCGCTCGATGTGGTACAGGGTCGCATCTTCTGGGCGCATTTGGACATGACTCTGACGATGAGGATGAGGACAGGCAGGAGCCGACGAATTTGACTATTAACCCGATACTAAAGATACAAAACGTGGAATCTAGAAAAGTGATATTAGAGGAAAGAATTGGCCAAAAGAAGATACCTGTTGTACTTGATGACGTAGACAAATTGGAGCAACTAAATGCTTTGGCTGCAAATCGTAAATGGTTCTGCCCAGGGAGTGTAATAATCATCACAACAAGGGATCAACGTCTTCTTAATTGGCTTGGAATTGACAAGGTATATAGGCTGGAAAAGTTGAGTGACAGAGAATCTGTTGAACTTTTTAGTTGGCATGCATTTAAGGAACCATTTCCTATTGAAGAATTTGTCGGGTTTACAGGTAAAGTGGTCTCCTACTGTGGGAGATTACCGTTAGCACTTGAGGTTCTTGGATCACATTTGTTTAAAAGGGGAATACAAGAGTGGATAAGTGTTTTGGAGAAACTCAAAAACATTCCCAATGAGCAAATACAAAAGAAGCTGAAAATAAGCTTTGATGGTTTAAACGATGACGAAGATCGGGAAATATTCCTTGATATAGCTTTTTTCTTTATCGGAATGGACAAAGACGAAGTAATTGATATATTGAATGGCTGTGGATATTCTACTGAAATTGGGATCAGTGTTCTCAGGGAACGATCTCTTGTAACAATTGACTCTAAGAACAAACTTAGAATGCATTATTTGTTGCGAGATATGGAAAGAGAAATCATTCGTGAGAATCTACCTTTACCCGAAGAACGCAGTAGATTATGGAATCCAGAAGAAGTTCTTGATGTCTTATCAAAAGACATGGGAACAAAAGCTATTCAGGGACTTGCTTTGAAGTTGTCAAGGATGAAACCAATTCATTTGAAGACCAATGCTTTTAGGAAGATGAAGAGACTAAGATTGCTTCAACTTGGTGGTGTACAACTCGATGGAGACTTTAAATACCTCTCAACCGATCTTCGATGGTTGTCCTGGCATGGATGTTCTTCAGAATATACAACTATAGGTTTTGATCAGGGAAATTTAGTTGCCATTGACTTCAAATATAGCAATCTCCAGCTAGTATGGAAGAAGAGGCAGATGCTAATGAAGTTGGAAATTCTCAATCTTAGTCATTCTCAATATTTGACAGAAACTCCTGACTTTTCAAACATTCCTAATCTTAAAAAGTTAATACTCAAACATTGTTCAAGGCTATCTTTGGTTTCCCATACCATTGGAGATCTTAAAAAAATTCTTCTAGTCAATCTGAAAGGTTGCACAAGCCTTCGTATACTTCCAAGAAGCATCTACAAGTTGAAATCTCTGAAAACTCTCATTCTTTCTGGATGTTCAGAAATTAACAAGTTGGAAGAGGATTTAGAACAGATGGAATCTTTGACAACTTTGATGGCCAATAAAACTGCTATAACACAAGTGCCAAATGCATTGATAAGATTGAAAAGCATTGTATATGTTTCTTTGTGTGGCTTTGAAGGATTGTCCCGTGATGTGTTTCCTTCAATCATTTGGTCATGGACCTCCCCAACAAATAACCTCTCACCCCAAATGCAAACATATGCAAATGTTTCATGTCTTGTTTCTTTAACTGTGCCAAATAATAGCTTCCATGGTACATCATCCATTATCGGAGAGCTCCCAAATATTCAGGGTATCAGGTTAGAAAGCGGTTCACAAATACAAACAACCGGAGATTTTACCTTGGATGCCATCAATATAAAAAATTGTAAGGAACTGGAAGCACCACCAGCCATATCACATGTTTTAAAAATGGATACCTCAGCCTTAGTTGATTGTCGCAGTCAAGGTGACATGTCTATATCAAAAGCTACCATCAGTTTCATTTTAATTCAAATGGTAACGAACTGTCCGGTCACAAAAATACTCAGAGAAAGCATTTCACAGAAACTGGCTGCCAGTACCAGTGATGTGGGAGAATGTTTGCTCCCTGGTGACAACAATACTGATTGGTTAAGTTTCAATGGTGAAGGTTCTTCTGTGATTTTCGAAGTCCCTAAAGTGAAAGGGCATAATTTGAAGGCAGTGACATTGTGCATTGTTTATTCCTCCCCAGATATCATGACATATGAAGGCCTAATTCTTAAAAATCTGTTGATCATTAATCACACAAAGACCACTCCTTATCTATATGAGGGAGATACCTTGCTTTCACTTAGAGATGAAGATTGGCAGAATGTCATATCAAATCTTGAAGCTGGTGACAAAGTTCAGGAGGTTGTTGTTTTGGGGGATGGAATCGTTGCGAAGAACACTGCAGTTTACCTCATTCATGATGAGTCGATCGACCAAAACATTGATGAATGCCAAGAAGATGTCATTGTGAATAGCATGGTTGTTGGTAAGAAAGAAGATGCTTCTAATGTTGATGATATGAGAGATAAGAATTTCAGTGTCCCTGCTGTTGATGCTACACCTGCAATCAGTAATAAGATTCCTGTTTCCGGCACAGATAAAAAATTCAAGTTGTTGGACAAATTGAATTGCTTCAACTGCAACAGAGCAAAATTGTAA 2688 0.3921 MGGTPASAYGVGMPVDPPAQQRQRPARVRRAARCGTGSHLLGAFGHDSDDEDEDRQEPTNLTINPILKIQNVESRKVILEERIGQKKIPVVLDDVDKLEQLNALAANRKWFCPGSVIIITTRDQRLLNWLGIDKVYRLEKLSDRESVELFSWHAFKEPFPIEEFVGFTGKVVSYCGRLPLALEVLGSHLFKRGIQEWISVLEKLKNIPNEQIQKKLKISFDGLNDDEDREIFLDIAFFFIGMDKDEVIDILNGCGYSTEIGISVLRERSLVTIDSKNKLRMHYLLRDMEREIIRENLPLPEERSRLWNPEEVLDVLSKDMGTKAIQGLALKLSRMKPIHLKTNAFRKMKRLRLLQLGGVQLDGDFKYLSTDLRWLSWHGCSSEYTTIGFDQGNLVAIDFKYSNLQLVWKKRQMLMKLEILNLSHSQYLTETPDFSNIPNLKKLILKHCSRLSLVSHTIGDLKKILLVNLKGCTSLRILPRSIYKLKSLKTLILSGCSEINKLEEDLEQMESLTTLMANKTAITQVPNALIRLKSIVYVSLCGFEGLSRDVFPSIIWSWTSPTNNLSPQMQTYANVSCLVSLTVPNNSFHGTSSIIGELPNIQGIRLESGSQIQTTGDFTLDAINIKNCKELEAPPAISHVLKMDTSALVDCRSQGDMSISKATISFILIQMVTNCPVTKILRESISQKLAASTSDVGECLLPGDNNTDWLSFNGEGSSVIFEVPKVKGHNLKAVTLCIVYSSPDIMTYEGLILKNLLIINHTKTTPYLYEGDTLLSLRDEDWQNVISNLEAGDKVQEVVVLGDGIVAKNTAVYLIHDESIDQNIDECQEDVIVNSMVVGKKEDASNVDDMRDKNFSVPAVDATPAISNKIPVSGTDKKFKLLDKLNCFNCNRAKL* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1943 895 Gene3D - 140 224 IPR042197 -
Ahy12g1943 895 Gene3D Ribonuclease Inhibitor 317 664 IPR032675 -
Ahy12g1943 895 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 67 814 - -
Ahy12g1943 895 SUPERFAMILY "Winged helix" DNA-binding domain 211 316 IPR036390 -
Ahy12g1943 895 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 814 IPR044974 GO:0006952
Ahy12g1943 895 Pfam NB-ARC domain 69 215 IPR002182 GO:0043531
Ahy12g1943 895 MobiDBLite consensus disorder prediction 1 31 - -
Ahy12g1943 895 PRINTS Disease resistance protein signature 175 189 - -
Ahy12g1943 895 PRINTS Disease resistance protein signature 82 96 - -
Ahy12g1943 895 PRINTS Disease resistance protein signature 483 499 - -
Ahy12g1943 895 MobiDBLite consensus disorder prediction 38 57 - -
Ahy12g1943 895 Gene3D - 46 132 IPR027417 -
Ahy12g1943 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 235 IPR027417 -
Ahy12g1943 895 SUPERFAMILY L domain-like 329 612 - -
Ahy12g1943 895 Coils Coil 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1943 Ahy-Chr12 101276645 101288007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1943 61 532 WRKY Transcription Factor Family AT4G12020 32.041 2.85e-55 207