Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1938 ATGCTCTGTTGTAAAAACAAAACTCAAAAGGTGCTGCCAGTATTTTACCATATAGATCCCTCGGAAGTGCGAAATCAAACTGGTAAGTTTGGACAAGCTTTTGATAACCTTATGAAAAGATATCCGGATAAAATAAATGGCAAGGAGCAGAGTTGGAGGAAAGCGCTCCGTGAAGTCGGGTGCATTGCAGGGTTTGTCATCCGAAAATCCAGGAATGAAAGTGAGGATATTAAGAACATTGTTGAACATATTACTCATATGCTGGACATGAAGGAACTGTTTGTTGCTAATCATCCGGTAGGAGTTGAATCTCGTGTTGAAGAGGTGATTGAACTGTTAAAAGACCAGCAGCAAGAAAATCCTCTCCTACTTGGTATATGGGGCATGGGAGGGAGTGGTAAAACAACCATTAGCAAAGTGATTTATAATAAACTTTTCCGCAAGTTTGAAGGTCGGTGTTTCCTCCTAAATATAAGAGAAGTTTGGGATCAAGATAATGGAATTCTTTATTTACAACAGCAACTTCTTTCTTCTATCTTCAAGACAACGAAAATAAAGGTAGAAAACATTGAATCTGGAAAGTCAATATTGGAAAAAAGACTTGGCCAGAAAAAGATTCTTCTTGTACTTGATGATGTGGACAAATTGGAGCAGCTAAATTCTTTAGCTGCAAGCCGTAAATGGTTCTGTCCTGGTAGCATAATAATCATCACAACAAGAGACGAGCATCTTCTACGTTGTCTTAGAATTGACAAGTTATATAGTATGAAAGAGTTAAATGACAAAGAATCCATTGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAGGTAATTGGGTCACATCTGTTTAATAGGAAAGTATATGAATGGAGGAGTGTTTTGAATAAACTCAAAACTATTCCAAACAATGATGTAAATAAGAAGCTTAAAATAAGTTTTGATGGTCTAAGTGATGATAGGGATAGAGAAATATTTCTTGATGTAGCATTTTTCTTTATTGGAATGGACAAAAATGATGTAATTGATATATTAAATGGCTGCGGGCATTAA 1125 0.3627 MLCCKNKTQKVLPVFYHIDPSEVRNQTGKFGQAFDNLMKRYPDKINGKEQSWRKALREVGCIAGFVIRKSRNESEDIKNIVEHITHMLDMKELFVANHPVGVESRVEEVIELLKDQQQENPLLLGIWGMGGSGKTTISKVIYNKLFRKFEGRCFLLNIREVWDQDNGILYLQQQLLSSIFKTTKIKVENIESGKSILEKRLGQKKILLVLDDVDKLEQLNSLAASRKWFCPGSIIIITTRDEHLLRCLRIDKLYSMKELNDKESIELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALEVIGSHLFNRKVYEWRSVLNKLKTIPNNDVNKKLKISFDGLSDDRDREIFLDVAFFFIGMDKNDVIDILNGCGH* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1938 374 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 374 IPR044974 GO:0006952
Ahy12g1938 374 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 64 IPR035897 -
Ahy12g1938 374 PRINTS Disease resistance protein signature 200 214 - -
Ahy12g1938 374 PRINTS Disease resistance protein signature 293 307 - -
Ahy12g1938 374 PRINTS Disease resistance protein signature 123 138 - -
Ahy12g1938 374 Pfam TIR domain 3 87 IPR000157 GO:0007165
Ahy12g1938 374 Gene3D - 93 252 IPR027417 -
Ahy12g1938 374 SMART AAA_5 120 255 IPR003593 -
Ahy12g1938 374 Gene3D - 1 92 IPR035897 -
Ahy12g1938 374 Gene3D - 258 342 IPR042197 -
Ahy12g1938 374 CDD AAA 100 242 - -
Ahy12g1938 374 Pfam NB-ARC domain 103 330 IPR002182 GO:0043531
Ahy12g1938 374 ProSiteProfiles TIR domain profile. 1 88 IPR000157 GO:0007165
Ahy12g1938 374 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 5 374 - -
Ahy12g1938 374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 352 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1938 Ahy-Chr12 101157246 101158817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1938 100 373 WRKY Transcription Factor Family AT5G45050 32.000 1.68e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1938 - - ahf:114924874 739.954