Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1937 ATGTCTTCCCAAAACCAAGAATATGATGCGTACATTAGTTCCGGATTGCAGTTCCTTCATCCTTTTATTTCAGGTCTCTATGATGCACTCAAAAGTGTTGGACTGCATGTTTTAGCAGACGGCACCGAGCCCAAGACTAATAAACTTTTATTATCTGGCGCAATCGAACGATGCAGAGTTTCTATCATAGTTTTCACAATAGCTTATGCTGAATCAACCTTGTACTTGCAAGAACTCGTGAAAATAATGGAGTGTCATCGGAGGAAAGATCAGAAGGTTGTGCCCGTGTTCTATTGCTTAGATCCCTCCCAAGTATGCAATCTGAGCGGTTATTTTGGGGAGATTTTGTCGCGAACTCTGCAAGGAATCTCAAGGGATGAACACAGGATGTTGAGTTATGAGGCCGCCCTTCTTCAACAAGCTGCTTCCATTTTACCCAGGTTTCTTCCAGATATCTGGAATAACAGAAAAGTTATGAGCGATATAGTTGGACATGTTACATCCTTGATAGATTCAGCGAAATTATTCATTGCGAAGCATCCGGTGGGAGTAGACTCTCGTGTGCAAGATTTGATTCAACTCTTAAACAATCAGAAAGCAGATGGTGTCCTCATAATAGCAATATGGGGAATGGCGGGAATAGGTAAAACTACAATTGCCAAAGCCCTCTACAATCAAATTAGCCACAATTTCGAGGCGAGGACATTTGTCCCAGACATCCAGGATAGCATGGCGGATTATACAAGGAGGCGGCTTCATTTCATTTTGAGAGACCCATATGAAACACAAGCGCATAACTTTGACTCAACAAGAAAGTTATGGTGGGAAGGACTTCGTTGCTTAAAGGTACTTCTTATAGTTGATAATGTGAGAAGTGACCTAGAGCTGGGGTTTTTGGCAGTAACTCGTGAAAGTTTTGGTCCAGGGAGTATAATAATCATCACGACAAGAGCTAAACACGATCGACTTCATGAGATTGGAGTTAATCATATATATAGAGTGAAAGAAATGGACTACAACGAATGTGTTGAGCTTTTTAGTTGGAGCGCATTCAACAAAGCCACTCCTGAAAGAAGTTTTTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTGCCACTGGCTCTTGTGTGTGTTGGCTCTGCTGTATCTGAAAAAAGTATACAAGAGTGGGAGAATGTATTGGACAGCTTCAAAAGATTCCCCTTTGAAGATGTATGGCAGGTTTTAAAAGAAAACATATTTTCTGTTGGATCTGAAGAAAAGAAAATATTTCTTGAACTAGCTTATTTGAGTCATCTCTTTATTGGAGTGGACCGAAATGATATATGTCAGATATTACAAGGAGCTGGACATCACGATGCATCGAGAGCAATTAAAGGGATTGAAGAGCATAGTCTTGTGTGGTTTGACAAGGACAAGCTTCGCATGAATCGTTTACTACAAGTCATCGGAAGAGAAATGTATATGAAGGAATCATCGATTGAGCCTCAGGGAACAAAAGCTATTGAGGGACTTGCTTTGAACCTACCAAAGTCACTGAATCCAACCCACTTAAAGACAGAAGCATTTAAGGAGATGAAGAGACTCAGATTGCTTCAGTTTGCGAATGTGCAACTTGTTGGAGACTTTAAATTTCTTTCGACAGATCTTCGATGGTTGTGCTGGCATGAATGTCCTCCAGAATATACAATTGCAAACTTTTATCAGGGAAATTTAGTTGCCATTGACTTCAAATATAGCAAACTCAACCTAGTATGGAAGAAGGGTCAGATGATGAAGAATCTAAAAATTCTCAATCTTAGTCATTCTCAACACTTGACACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACTTCGGTTTCTCATACCATTGAACATCTCAAGCAAGTTCTTCTAATCAATTTGAAAGGGTGTTCAAGGCTTCGTGTACTTCCAAGAAGCATCTACAAGCTGAGATCTCTCAAAACTCTCATTCTCTCAGAATGTTCATTGATTGATAAGCTAGAGGAAGACATAGAACAGATGGAATCATTGGCAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCTCATGCACTACTAAGATTAAAGAGCATTGTGTATATTTCTTTGTGCGACTTTGAAGGATTATCGCGCAATGTATTTCCTTCAATCATTTGGTCATGGACCTCTCCAACAAATAATTTCTCACCCCAAGTGCAAACACTTTTGGACTTGTCAAATCTTGTTTCCTTAGTAGTCCCAAAAAGAAATTCTCAAGGCCTATCATCCATTATCAGAGACCTTCCACAGGTTCAGAATGTTAGGATGGAGTGTGGCTCACAACTCCAAATAACAGGAGATGTAGCTTCAGATACTTGTAACGTCACAAACTGCAATGAAATGATAGTGTCATCATGTGCATCATCAGTTGGTTGTTGCAGTGAAGGTGATGTTGCTGAATTAGAAAATTCCTTGAATTCAATTTTAATCCAAATGGGAATGAATTGTTCTGTCACAAAGGCACTCAGAGAGAATATTTTGCAGAAATTTAATGCCAGAGTACCTGGAGAATGTTTGCTTCCTGGCAATAAGAATCCTGATTGGTTAACATTCAGTGGAGAAGGTTCTTCTGTAATTTTCGATGTCCCTCATGTGAATGGATGCAAGTTAAAAACAATGATGTTGTGTGTCTCCTACTCTTCATCTCCAAACATCAAAGCATCTGAAGGCCATATTATTAAAAATCTGTTTATCATAAATCTCACAAAGACCACTCATTATCTCTACGATGGAGATACATTGGCTTCACTTAGAGAAGAGGAATGGCATAAAGTGATTTCAAACCTTGAAGCTGGAGACAAAGTACAGATTGTTGTTGTTGCTAGGGTAGGAATCATAGTGAAGAAGATAGTGGTTTATCTCATATATGGTGAACCAATTGATATTGTTTGTGGTTATGATATGGTAGCAGATGGAAATGTCACTGTTCATGGTGGAGATGAAAAAGTAAAAAAATTCGAAGTCACTTGGAAAACGAAAACTCCAGAGAGTGTGATCACCAAAGAGTATTGTGTGACTTGTCAATTTGAGTTGAAATTGTGGGGATGTAAGTATTGGCTCCAGAGAGGATGCAACAAGAGGTGCAGATGA 3183 0.3905 MSSQNQEYDAYISSGLQFLHPFISGLYDALKSVGLHVLADGTEPKTNKLLLSGAIERCRVSIIVFTIAYAESTLYLQELVKIMECHRRKDQKVVPVFYCLDPSQVCNLSGYFGEILSRTLQGISRDEHRMLSYEAALLQQAASILPRFLPDIWNNRKVMSDIVGHVTSLIDSAKLFIAKHPVGVDSRVQDLIQLLNNQKADGVLIIAIWGMAGIGKTTIAKALYNQISHNFEARTFVPDIQDSMADYTRRRLHFILRDPYETQAHNFDSTRKLWWEGLRCLKVLLIVDNVRSDLELGFLAVTRESFGPGSIIIITTRAKHDRLHEIGVNHIYRVKEMDYNECVELFSWSAFNKATPERSFSGLINYAIEYSDGLPLALVCVGSAVSEKSIQEWENVLDSFKRFPFEDVWQVLKENIFSVGSEEKKIFLELAYLSHLFIGVDRNDICQILQGAGHHDASRAIKGIEEHSLVWFDKDKLRMNRLLQVIGREMYMKESSIEPQGTKAIEGLALNLPKSLNPTHLKTEAFKEMKRLRLLQFANVQLVGDFKFLSTDLRWLCWHECPPEYTIANFYQGNLVAIDFKYSKLNLVWKKGQMMKNLKILNLSHSQHLTQTPDFSNMPNLEKLILKYCPKLTSVSHTIEHLKQVLLINLKGCSRLRVLPRSIYKLRSLKTLILSECSLIDKLEEDIEQMESLATLMADKTAITQVPHALLRLKSIVYISLCDFEGLSRNVFPSIIWSWTSPTNNFSPQVQTLLDLSNLVSLVVPKRNSQGLSSIIRDLPQVQNVRMECGSQLQITGDVASDTCNVTNCNEMIVSSCASSVGCCSEGDVAELENSLNSILIQMGMNCSVTKALRENILQKFNARVPGECLLPGNKNPDWLTFSGEGSSVIFDVPHVNGCKLKTMMLCVSYSSSPNIKASEGHIIKNLFIINLTKTTHYLYDGDTLASLREEEWHKVISNLEAGDKVQIVVVARVGIIVKKIVVYLIYGEPIDIVCGYDMVADGNVTVHGGDEKVKKFEVTWKTKTPESVITKEYCVTCQFELKLWGCKYWLQRGCNKRCR* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1937 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 429 IPR027417 -
Ahy12g1937 1060 CDD AAA 182 230 - -
Ahy12g1937 1060 Coils Coil 680 700 - -
Ahy12g1937 1060 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 18 985 - -
Ahy12g1937 1060 SUPERFAMILY L domain-like 518 817 - -
Ahy12g1937 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 985 IPR044974 GO:0006952
Ahy12g1937 1060 SMART till_3 7 138 IPR000157 GO:0007165
Ahy12g1937 1060 Gene3D - 172 324 IPR027417 -
Ahy12g1937 1060 Gene3D Ribonuclease Inhibitor 504 731 IPR032675 -
Ahy12g1937 1060 ProSiteProfiles TIR domain profile. 6 131 IPR000157 GO:0007165
Ahy12g1937 1060 Gene3D - 1 171 IPR035897 -
Ahy12g1937 1060 Pfam TIR domain 8 139 IPR000157 GO:0007165
Ahy12g1937 1060 PRINTS Disease resistance protein signature 593 609 - -
Ahy12g1937 1060 PRINTS Disease resistance protein signature 277 291 - -
Ahy12g1937 1060 PRINTS Disease resistance protein signature 205 220 - -
Ahy12g1937 1060 PRINTS Disease resistance protein signature 371 385 - -
Ahy12g1937 1060 Pfam NB-ARC domain 186 408 IPR002182 GO:0043531
Ahy12g1937 1060 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 124 IPR035897 -
Ahy12g1937 1060 Gene3D - 337 421 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1937 Ahy-Chr12 101153551 101161741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1937 3 737 WRKY Transcription Factor Family AT4G12020 27.389 1.39e-47 184