Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1921 ATGTCGGATAAGGGCAAAGCCGTAGCCACCACCTCCAAAAAGAGAAAACACTCTACCCCCTCCACTCCTTCCATCTACAAGAACTATGCCAGGAATCCATTGCAGGACGAGGATAAAGAGAATCAGCTGTTGCCTTCTACCGATCCGGGCAAATTCCCCAATCTCTACTGTGAGCTTCGGTTTTCCAGATATCGAACCACGAAGCTTAATATTGAGAAGAAGTTGCTCCTACCTAATGATGTGAGACGGCGCATTAACGGTCGGATCCTTGAGTTAGGTATTGATTTTGTTGACCGGGATTTGGGTGACATCAATATATCTTGGGTGAGGGGTAGAGAGATTCTACTCACCGAGGCCGCCATTGGAGAGGCACTACATTGCCGGCACATTCCACATGACCAGTGTGCCCATCATCAGGCTGAGATAGCCATCCACACCATGACTTTTGATTATGAGGCGCTTCGGCGCGTGATTGGGATACCAGAGGCTTCATGGATGGAGGTGTCTTTAAGTGATGGGAATGGTGAGCTCCTGGGGACCGACATCGAGGCTGATGAGGAATCGAACCTGGAGGACATGGGTGGTGAGGATGTGGCAGACGAGGATTTGGGTGAATATGAAGATGTCGCTAGGTTAGATGTGGATGACATAAAGCGGATGGGGTGGGATAGTGTTGTCGCAGCTTATGAGTTTTACAGGAAACTGGGAAAGTGTCATGGATTCGGCGTCAGGAAGGGTGATTCAGGCAAAGACTGTAGAGGAAATTTGATTAGATATAGGATTTTTTGTAACAAGGAAGGGTTGAGGGATGGGAGACACAACGACAGAGTTGATAGACGGAGGGTACACAAACCTAAGATGCGGACCAATTGCGAGGCTAAGCTCTCCATATACTTTGACAAAACTGAGCGTTGTTGGAAGGTGTGGAAAGTTGTGACAGAACTTAATCACGACTTAACGCCTGCATCGATGGTCCATCTGATTGCCAACCATCGTGAAATGACCGATGCAACAAAGGCTCAGATTGATGGGTTGCATGCAAGTGGCATTGCCACATCGAAGATTGTGGGATACATGGCCGGAATGGCTAGTAGGTACTCGTTGTTGGGTTTCTTGAAGAAGGATGTGTACAACTACGCTGATAGAATCCGACGCGCTAACATATCGGATGGCGATGCGAATGCGGCTATTGTTTATCTGGAGGGAAAGGCTGGTTCGGATCCCATGTCGGTTGCTAGATATAGTGTAACAAAAGAAGAAAGGCTGGCAAATTTAATTTGGGCCGATGGAGCTAGCAGAGTTGATTATCAATATTTTGGAGATGTGCTGGCCTTCGACTCGACCTATAAGAAAAACAAGTACAAAAAACCTCTTGTGATTTTTTCAGGGTCTAACAATCACAAGCAAACCACGATTTTTGGGTTTCGGCTATTATTTGATGAGAGTGTCACTTCTTACAAGTCGATGTTAGAAAATCTGTTTGAGGTGATGTGCAAGAAGAAACCCTCTGTGGTTGTGACTAACGGGGATAAGAATGTTACCTCGAATGTGAAAGATGCAGTTTTACGTAGCTCTTTTAGAAGGTGGTTATATGTTGACATAGAAATAGAGGAGTTTGAGATGAAGTGGGAGCATGCGGTTGCTGATTATGACCTACATGGAAAGGAGTGGGCCACCCAAATGTATGAGAGGAGGAGGATGTGGGCAAATGCATATCTGCGAGATAAGTTTTGCGCTGGTTTTCGGACAACGTCTCGATGTGAAGGGATTAATGCCTTTGTAAAAAAGTTCTCGAAGACAACCCACACTATAATTGAGTTAGTTCAGAATTTAGAGTTGGTGGTCCGGGAGTACCAAAATAAGGAGTTACTACTCCACTTCAACTCCATGAATTCCATTCCAGTCATGACCACTGGTTTGACCTCGATTGAGCAACATGCCACCTCAGTGTATACGAGAGAAGTTTTTACTGATGTCAAAAAACAGATAGTTCGAGCTGCAGCGTTGATTCTTATATCCAAGAAAAGGTGCCTAAACACAATGGTCTACACGGATGAGGAGTACAAGCTTCCAGCTATGAGAATCAAGGTTGCATTTGGCAGGTCCTTGGAAAAAATTGACTGCCAATGTAACTTTTGGAGGAAGAATAGGTATCCCTGTAAACATATGTTCTTCGTGATGAAGTCTGAACATGTGACAGCGATCCCGGATGCACTTGTGTTGTAG 2226 0.4528 MSDKGKAVATTSKKRKHSTPSTPSIYKNYARNPLQDEDKENQLLPSTDPGKFPNLYCELRFSRYRTTKLNIEKKLLLPNDVRRRINGRILELGIDFVDRDLGDINISWVRGREILLTEAAIGEALHCRHIPHDQCAHHQAEIAIHTMTFDYEALRRVIGIPEASWMEVSLSDGNGELLGTDIEADEESNLEDMGGEDVADEDLGEYEDVARLDVDDIKRMGWDSVVAAYEFYRKLGKCHGFGVRKGDSGKDCRGNLIRYRIFCNKEGLRDGRHNDRVDRRRVHKPKMRTNCEAKLSIYFDKTERCWKVWKVVTELNHDLTPASMVHLIANHREMTDATKAQIDGLHASGIATSKIVGYMAGMASRYSLLGFLKKDVYNYADRIRRANISDGDANAAIVYLEGKAGSDPMSVARYSVTKEERLANLIWADGASRVDYQYFGDVLAFDSTYKKNKYKKPLVIFSGSNNHKQTTIFGFRLLFDESVTSYKSMLENLFEVMCKKKPSVVVTNGDKNVTSNVKDAVLRSSFRRWLYVDIEIEEFEMKWEHAVADYDLHGKEWATQMYERRRMWANAYLRDKFCAGFRTTSRCEGINAFVKKFSKTTHTIIELVQNLELVVREYQNKELLLHFNSMNSIPVMTTGLTSIEQHATSVYTREVFTDVKKQIVRAAALILISKKRCLNTMVYTDEEYKLPAMRIKVAFGRSLEKIDCQCNFWRKNRYPCKHMFFVMKSEHVTAIPDALVL* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1921 741 MobiDBLite consensus disorder prediction 14 29 - -
Ahy12g1921 741 Pfam FAR1 DNA-binding domain 230 320 IPR004330 -
Ahy12g1921 741 PANTHER OS02G0262500 PROTEIN 192 514 - -
Ahy12g1921 741 MobiDBLite consensus disorder prediction 1 32 - -
Ahy12g1921 741 Pfam MULE transposase domain 442 519 IPR018289 -
Ahy12g1921 741 ProSiteProfiles Zinc finger SWIM-type profile. 693 731 IPR007527 GO:0008270
Ahy12g1921 741 Pfam SWIM zinc finger 702 723 IPR007527 GO:0008270
Ahy12g1921 741 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 192 514 IPR031052 GO:0006355
Ahy12g1921 741 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 511 727 IPR031052 GO:0006355
Ahy12g1921 741 PANTHER OS02G0262500 PROTEIN 511 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1921 Ahy-Chr12 100768729 100775641 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g1921 FAR1 7.40E-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1921 - - ahf:112730358 1497.64