Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1911 ATGAAATTAAAAGTTGAGGAATATGATGGGAGCTTGCCTAAGCTTATCTCGAGGCCACAGTCATGGACAAAGGTGGCTAACATTATTTTTGTGGATTTGCCAATGGGAACTGGCTTCTCTTACGCCAAAAATGTCATTCCCCATCGAAGTGACTGGAAGGTTGTTCACCAAACCCATCGATTTATTAGAAAGTGGCTTGCTGAGAACCCGGAATTTCTTTCAAATAAGTTCTACATGGCAGCTGATTCATACTCCGGCATTCCTGCTCCTCCTATTATTCAAGAGATCGCTGATGGAAATGAAAGAGGTCTCAAACCCCGGATAAATCTCCAGGGATATATACTAGGAAACCCAGTAACATCAGGATTAGAACATAATGATCAGATCCCATATGTTCACGGAATGGGACTTATCTCTGATGAACTCTATTGGTCCTTGCAAAATACTTGTCACGGCAACATTATAAATGTGGATTCTACGAACAAACCGTGTCTAAATGACATGCAGTATTATTATGAGGCAAAATTTGTTCACAATATGGGTAAAACTTTCACTGTTTCTTATCTTTTCCAGCTACTTGAAAATATTGAGTTGTTAAACCTTTTGGAGATATATTGTGTTGATGAGAATATCAAAGGAACAAGACAGAACCCCAGGAGATCTCTGGCTCAGAAGATAAAGGCACCTTTGAGTTCTCCGGTCACACTGCCGGATATGCGCTGCCAAATTTATGGTGGCTTCCTTCTTATGGAATGGATAAATGACCCTGCTGTCCGTAAGGCACTGCATATTCGCGAGGGAACTATAGGGAAATGGAACTGGTGCTATGGTGACGATTATGTATTTGAAATCCCTAGCAGCGTTCCATTTCATGCAAACCTAAGTGCCAAAGGCTATCCTTCCTTGATATACAGTGGGGATCACGATGCACTAGTTCCTTTCTCGTCGACTCAACGATGGATAAGGTCTCTAAATTACTCCATTCTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATACACGAGGACTTACTCGAATCAAATGACATTTGCAACTATAAGAGGTGGATCGCATACACCTCAAGATACCAAGCCGGACGAAAGTTTTGTCATGTTCGTTAGGTGGATATCTAACAAGCCTCTTTAG 1158 0.4145 MKLKVEEYDGSLPKLISRPQSWTKVANIIFVDLPMGTGFSYAKNVIPHRSDWKVVHQTHRFIRKWLAENPEFLSNKFYMAADSYSGIPAPPIIQEIADGNERGLKPRINLQGYILGNPVTSGLEHNDQIPYVHGMGLISDELYWSLQNTCHGNIINVDSTNKPCLNDMQYYYEAKFVHNMGKTFTVSYLFQLLENIELLNLLEIYCVDENIKGTRQNPRRSLAQKIKAPLSSPVTLPDMRCQIYGGFLLMEWINDPAVRKALHIREGTIGKWNWCYGDDYVFEIPSSVPFHANLSAKGYPSLIYSGDHDALVPFSSTQRWIRSLNYSILDDWRPWYLNDQVAGYTRTYSNQMTFATIRGGSHTPQDTKPDESFVMFVRWISNKPL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1911 385 Gene3D alpha/beta hydrolase 3 385 IPR029058 -
Ahy12g1911 385 PRINTS Carboxypeptidase C serine protease (S10) family signature 31 41 IPR001563 GO:0004185|GO:0006508
Ahy12g1911 385 PRINTS Carboxypeptidase C serine protease (S10) family signature 352 365 IPR001563 GO:0004185|GO:0006508
Ahy12g1911 385 PRINTS Carboxypeptidase C serine protease (S10) family signature 65 90 IPR001563 GO:0004185|GO:0006508
Ahy12g1911 385 PRINTS Carboxypeptidase C serine protease (S10) family signature 18 30 IPR001563 GO:0004185|GO:0006508
Ahy12g1911 385 SUPERFAMILY alpha/beta-Hydrolases 11 384 IPR029058 -
Ahy12g1911 385 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 5 382 - -
Ahy12g1911 385 Pfam Serine carboxypeptidase 12 382 IPR001563 GO:0004185|GO:0006508
Ahy12g1911 385 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 5 382 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1911 Ahy-Chr12 100524069 100528783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1911 252 385 Calmodulin-binding Proteins AT2G22960 61.481 1.51e-52 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1911 K16296 - gmx:100780069 499.59