Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1909 ATGGAGCACAATTCCGTTGAACCGAGTTATCTCGTGCCAGTTTCTTTTACCGGTGATTCGTTCGACGGAGAAAGTGAACAGTTGGACAAGGCCATAGAATGTACGAAAATTACTGAGTTGGAATGTCATGACACGGAACTTGTTGACGAGTTACCAGACCATAGTTGCCTTGCTGACAATGAAATACCAAGAGTCGGGATGTGGTTTGAGCATTTGAAGTTGGCCCAAGATTTTTATGCGACCTATGCAAAAAAAGTTGGTTTCACAAGTAAGATAAGGGCCATAAATTTTGACAGGATGACAAAGCAACCGATCAACCAATCTATCCATTGTAATCGGGAGGGTTTCCGGGCGTCTCGTGTGAAGGCACCCATACGGAAGAACACAATGGCAGGTGTGGGATGCAGAGCAAGAATATATGCAAAGTTCGATAGGGAAAAGCATGATTGGGTCTTGTTGAAGGTTGAACTAAATCACTCGCACCCGTGTTCAACTAGGAAGGCGGTGCACTACCATGAAAACAGGGAGTTAACAATGCATGCGAAGTGTATCATTGAGGTTAATGATGAGGCGGGCATTCGACCCAACAAGACCTTTCCAGCATTAGCCAATGAAGTTGGTGGGCCTTCGAACTTGGGCTTCTCAGAGAAGGACGTCAGGAATTACATTTCATCAAGACTCCGATCCACAAATGTCAACGCAGATGTCAAGGAGATGCTGAACTACTTCATGCGAATGAAGGAGTTGAATCCGAACTACTTTTACGCAGTGAATATAAATGAGGATAACAAGTTTACGAGTGCAGTTTGGGTGGATGCAAGGTGTTGGGCATCTTATGAATACTATGGAGAGGTGGTCTCATTTGATACCACATACAGCACGAACCGGCATGGATTGCCGTTCGCTGCTTTCATTGGTGTGAACCACCATGGTAAGTCTACTTTGCTAGGCTGCGCTCTGCTAGGCAGTGAGGAGATCCCGAGTTTTGAGTGGGTGTTCACACAATGGCTGGAGTGCATGGGAACGGCACCGAAGGGCATCATCACAGACCAATGCAAGTCTATGTTTGGTGCAATTAAGAAGGTCCTACCCAGTACACGACACCGGTGGTGCATATGGCATATAACACAAAAGATACACAACAAGCTTGGAGGTTATTCTAGGTTCAAAGAGTTGAATGCTGAGTTGAAACACATTATATGGAACTCTAAGTTGGTTGAGGATTTCGAGGATCATTGGGCTGAGTTCATTGATGAGTTCAACTTACATCACAACAGATGGCTATCAAGTTTGTGTCTTTTTGGGAAAATCATGTGCCGGAAGTGCTTAGATGTTGTTGTGTTCTTGTATTCTGTTCTGGAAAAACGTTCTTATGCATGGTTTTATTTTTTGTTCGTCCATGAGTTTGACAATGTCCTAGGAACAAAAGAGCAGAAGGAACTGGAGAACGATGCTGCAGACTCGAGAGGTCTAATCCCATGTTCAACTAGATCAGCCATCGAGAGACGATTTCAAAAAGAGTATACCAACAAGATGTTTAGGGATGTCCAAACCGAGTTTGGTAAGAAGGCTGATTGCACTATTTGTGCCGTGGATGAACATGGCAACTCCGCTAGGGTAAAAGTGGAAGAGAAAATACTAGTCTATGAGACGACTCGATATGTTACGTTTGACGTCCATTTTGGTCATTCGACACACGAGGTTCGATGTGATTGCAACTTGTTCGAGAGTGCAGGTATATTATGTTGCCACTGTCTTGTAGTACTTTCATCTTACAAAGTTAATGAGGTGCCTTCCTGCTATGTTTTACCTCGTTGGAGCAAGAACATAAAGCGCAAGCACACCTACATTAAGAGTAGCCATGACGTTAGACGTTCAAATGAAAGCCATAACATATTCAGAGAGTTGTGTGCACATTTCTATAATGTTGCACAGGAATTCACGGACTGTGATGATGAGGCAGACATGCTGCATAATGTTCTGGAGGATGCAAGGGCCAAGCTAGTAGATTACCGTGGCAAGATGCGAATAACACTGTCGCTACTGCACACAATAGCATCATCACAGGCCCTTCAACCGTTTTCGGCACAGAGGACATTCAGGCCCCATCAAAGGTAA 2118 0.4424 MEHNSVEPSYLVPVSFTGDSFDGESEQLDKAIECTKITELECHDTELVDELPDHSCLADNEIPRVGMWFEHLKLAQDFYATYAKKVGFTSKIRAINFDRMTKQPINQSIHCNREGFRASRVKAPIRKNTMAGVGCRARIYAKFDREKHDWVLLKVELNHSHPCSTRKAVHYHENRELTMHAKCIIEVNDEAGIRPNKTFPALANEVGGPSNLGFSEKDVRNYISSRLRSTNVNADVKEMLNYFMRMKELNPNYFYAVNINEDNKFTSAVWVDARCWASYEYYGEVVSFDTTYSTNRHGLPFAAFIGVNHHGKSTLLGCALLGSEEIPSFEWVFTQWLECMGTAPKGIITDQCKSMFGAIKKVLPSTRHRWCIWHITQKIHNKLGGYSRFKELNAELKHIIWNSKLVEDFEDHWAEFIDEFNLHHNRWLSSLCLFGKIMCRKCLDVVVFLYSVLEKRSYAWFYFLFVHEFDNVLGTKEQKELENDAADSRGLIPCSTRSAIERRFQKEYTNKMFRDVQTEFGKKADCTICAVDEHGNSARVKVEEKILVYETTRYVTFDVHFGHSTHEVRCDCNLFESAGILCCHCLVVLSSYKVNEVPSCYVLPRWSKNIKRKHTYIKSSHDVRRSNESHNIFRELCAHFYNVAQEFTDCDDEADMLHNVLEDARAKLVDYRGKMRITLSLLHTIASSQALQPFSAQRTFRPHQR* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1909 705 ProSiteProfiles Zinc finger SWIM-type profile. 555 593 IPR007527 GO:0008270
Ahy12g1909 705 SMART 26again6 568 595 IPR006564 GO:0008270
Ahy12g1909 705 Pfam MULE transposase domain 285 378 IPR018289 -
Ahy12g1909 705 Pfam FAR1 DNA-binding domain 77 164 IPR004330 -
Ahy12g1909 705 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 680 IPR031052 GO:0006355
Ahy12g1909 705 PANTHER OS03G0843700 PROTEIN 44 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1909 Ahy-Chr12 100416243 100419533 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g1909 MULE 5.70E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1909 - - aip:107627581 1474.14