Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1892 ATGCGCAATCTGAGCCATCGAAATCTCATGAAGATCATAGGTTGTTGTTCAAGTATAGATTACAAGCTTTTAGTGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAGATGTGGCATCTGCATTGGAGTATCTGCATCATGGATCTTCACCTATAGTGGTTCATTGTGATGTCAAACCTTGTAATGTCTTATTGGATGAAGACATGGTTGGCCATGTCAGTGGCTTTGGCATTGCCAAATTGCTTGGCGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACTGGGTAAGTTATGCTACACCAGATTATAA 390 0.4077 MRNLSHRNLMKIIGCCSSIDYKLLVMEFMPNGSLERWLYSHNHCLDFLQRLNIMIDVASALEYLHHGSSPIVVHCDVKPCNVLLDEDMVGHVSGFGIAKLLGEGQSKEYTKTMATVGYIALGKLCYTRL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1892 129 SUPERFAMILY Protein kinase-like (PK-like) 1 120 IPR011009 -
Ahy12g1892 129 Pfam Protein kinase domain 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1892 129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Ahy12g1892 129 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 1 120 - -
Ahy12g1892 129 Gene3D Phosphorylase Kinase; domain 1 1 32 - -
Ahy12g1892 129 PANTHER RECEPTOR-LIKE PROTEIN 55 1 120 - -
Ahy12g1892 129 SMART tyrkin_6 1 129 IPR020635 GO:0004713|GO:0006468
Ahy12g1892 129 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1892 129 Gene3D Transferase(Phosphotransferase) domain 1 33 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1892 Ahy-Chr12 100180102 100180491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1892 1 117 Receptor kinase-like Gene Family AT3G47090 43.511 5.09e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy12g1892 Pkinase 9.90E-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1892 - K13420 ahf:112730346 270.011