Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1882 ATGGGAGCTCGTTGCTCCAAATTCTCTTTTTGCTGGTTCCACTCGAACCTCAAACCATGTGTCCTTGAATCCCCCGACCAAGAAAATGGTGGAAAGAGTGAAAAGGAGTTGTGTGTGAGGTTTGGAGAGTTCAAGTTGGAGGAACTGAAGGGTGCAACAAACGGTTTCAGTTCGGAGAACATAGTGTCTGAGCATGGAGAGAAGGCTCCCAATGTGGTCTACAAAGGGAAGCTTCAAAATGGAAATTCCATCGCCATTAAACGCTTCAACAAGTTTGCTTGGCCCGATTCTCGCCAATTCCTTGAAGAAGCAAGGCAAGTGGGGAGCCTTAGAAGTGAACGTTTGGCGAATTTGATTGGTTATTGCTATGAAGGGGAAGAGAGGCTTCTAGTTGCTGAGTTCATGCCCCATGAAACACTTGCCAAACATCTCTTTCATTGGGAGAGAGAGCCAATGAAATGGGCAATGAGGTTGAGGGTGGCATTGTACTTAGCTCAAGGTCTAGAGTATTGCACAAGTAAAGGAAGGGGTTTGTATCATGATCTGAATGCCTATAGAATCTTGTTTGACCAGGATGGTAATCCTAGGTTGTCTTGCTTTGGCCTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGCACTAATTTGGCTTTCACCCCTCCTGAGTATCTAAGGACTGGGAGAGTGACCCCAGAGAGTGTGGTTTATAGTTTTGGAACATTGTTGCTTGATCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTTGACCTTATTCGGGGGAAGAATTTCTTGATGTTGATGGATTCAGCGTTGGAGGGTCATTTCTCAAAAGATGATGGAACAGAGTTGGTTCGTTTGGCTTCTCGTTGTTTGCAGTATGAACCTCGTGAGAGGCCAAATGCTAAGTCTCTTGTTGCTTCTCTCATCTCACTTCACAAACAATCAGAGGTTCCCTCATATGTTCTGATGGGTCTGAAGCATGAAACTACATTATCCTCAACAAAGCAATTGGCATTGACACCTTTTGGGGAAGCTTGTTTAAGAGTGGACCTTACTGCCATACATGAAATATTAGAGAAGATTGGTTACAAAGATGATGAAGGAATTGCCAATGAGCTTTCATTTCAATTATGGACCAGTCAAATGCAGGAGACCTTGAATTTGAAGAAGCATGGAGATACTGCTTTTCGAGCAAAGGACTTTGCCACTGCCATTAATTGCTATACTCAATTCATAGATGGAGGAACAATGGTATCACCAACAGTGTATGCAAGGAGGTGCTTATCATATTTGATGAAAGAGAAAGGAGAAGAAGCATTAGGAGATGCAATGCAAGCCCAAACAGTGTCTCCTCAATGGCTCACTGCTTTCTATCTTCAAGCAGCTTGTCTCTTCACCCTTGGAATGGATCATGATGCTCAACAAACTCTCAACCATGCCACTAACATGGAACCCAAAACAAACAAAATTTGA 1479 0.4348 MGARCSKFSFCWFHSNLKPCVLESPDQENGGKSEKELCVRFGEFKLEELKGATNGFSSENIVSEHGEKAPNVVYKGKLQNGNSIAIKRFNKFAWPDSRQFLEEARQVGSLRSERLANLIGYCYEGEERLLVAEFMPHETLAKHLFHWEREPMKWAMRLRVALYLAQGLEYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEPRERPNAKSLVASLISLHKQSEVPSYVLMGLKHETTLSSTKQLALTPFGEACLRVDLTAIHEILEKIGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFATAINCYTQFIDGGTMVSPTVYARRCLSYLMKEKGEEALGDAMQAQTVSPQWLTAFYLQAACLFTLGMDHDAQQTLNHATNMEPKTNKI* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1882 492 Gene3D Tetratricopeptide repeat domain 384 492 IPR011990 GO:0005515
Ahy12g1882 492 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1882 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 - -
Ahy12g1882 492 SUPERFAMILY Protein kinase-like (PK-like) 41 318 IPR011009 -
Ahy12g1882 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
Ahy12g1882 492 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Ahy12g1882 492 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Ahy12g1882 492 SUPERFAMILY TPR-like 388 490 IPR011990 GO:0005515
Ahy12g1882 492 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1882 Ahy-Chr12 99959398 99965347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1882 44 310 Glycoside Hydrolase AT3G07070 34.915 9.21e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Ahy12g1882 PK_Tyr_Ser-Thr 6.30E-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1882 - - gmx:100814477 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1882 12 99959398 99965347 Ahy12g1882 12 99959398 99965347 ECH