Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1874 ATGGCATGGAGGGATGGTTACACTGTTCAGATTTTACAGCATGGTAGATTCTTCATTGCGGCATCGGTTCTGACAACTGGTTCTAATGATCCCTATGGTGTTCTAGGTGTTTATCTCAGTTCAAATCATCTACATAGAATGGCTCAGTTTGCTGAATTAACTTTAGTCACCCAACAGTTCGATGTTAAGGTTGTGTTAATGGGTGATTTTAATGTCATTTCTAATCAATTGGAGAAAGCAGGTGGGGGTGCTAAATCTTCTTTTTCTATTGAAATCTTTAACAGTTTTATTGATGATAATTCCCTGATTGATATTGGTATGGTCGGAAGACCATTCACTTGGTCGAATAGACGGAGTGGTGATGAGTTGATACAGGAAAGACTGGACCGATTCCTGGACGGTACTACCTACCACAAGGGATGCAAGAGGCCGCAATGTGAGATTAGAGGAACTCCAGCGAACATGAGTGGTTGTTCTTCACTACAGCCAAGCCCACAGGCATCAACGTTCCCAAGCCCTGTTCCTTCCTACCATGCTAGCCCAACTTCCTCATCATTCCCCAACCCCTCTCGCATTGATCGCAACCTTCAAAACCCCTCTTCATTCCTCCTACCATTCATTCATAACATCACCTCCATCCCCACAAACCTTCCTCCTCTTAGAATATCCAATAGTGCCCCTGTTACCCCTCCTCTTTCTTCCCCAACCTCTAGGGGTTCTAAAAGGAAGGCGGATTTTGAATCCCTCTCCAATGTTTCCTCTCTTAATTCGTTCCGCCATCCTCTCTTTTCAGTATCCGCCCCATCCAGTCCCTTCCGCCGCCACCAATTGGCTACTTCCACCATTCCTGAGTGTGATGAATCTGATGCTTCCACTGTGGACTCCGGTCGCTGGGTTAGTTTTCAGACAACGACGGCCTCGGCTGCTCCTCCATCGCCTACCTTTAACCTTGTGAAACCAGCAATGCAGCAGATCACTCCCCAGAGTTCCATGGATATGAATGAAGGCATGCAATGGGGCCAGACTGCAGAGAAAGGAAGACCATCGGATTTTGACTTTGAGAATGGTAGAGTGAAGCCATGGGAGGGTGAGAGGATACATGAGGTGGGAGTGGATGAGTTGGAACTTACTCTAGGCTGTGGAAAGGCCTGA 1152 0.4688 MAWRDGYTVQILQHGRFFIAASVLTTGSNDPYGVLGVYLSSNHLHRMAQFAELTLVTQQFDVKVVLMGDFNVISNQLEKAGGGAKSSFSIEIFNSFIDDNSLIDIGMVGRPFTWSNRRSGDELIQERLDRFLDGTTYHKGCKRPQCEIRGTPANMSGCSSLQPSPQASTFPSPVPSYHASPTSSSFPNPSRIDRNLQNPSSFLLPFIHNITSIPTNLPPLRISNSAPVTPPLSSPTSRGSKRKADFESLSNVSSLNSFRHPLFSVSAPSSPFRRHQLATSTIPECDESDASTVDSGRWVSFQTTTASAAPPSPTFNLVKPAMQQITPQSSMDMNEGMQWGQTAEKGRPSDFDFENGRVKPWEGERIHEVGVDELELTLGCGKA* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1874 383 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 133 382 - -
Ahy12g1874 383 MobiDBLite consensus disorder prediction 156 194 - -
Ahy12g1874 383 MobiDBLite consensus disorder prediction 221 239 - -
Ahy12g1874 383 Gene3D Endonuclease/exonuclease/phosphatase 3 156 IPR036691 -
Ahy12g1874 383 MobiDBLite consensus disorder prediction 221 245 - -
Ahy12g1874 383 Pfam BES1/BZR1 plant transcription factor, N-terminal 133 195 IPR008540 -
Ahy12g1874 383 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 133 382 IPR033264 GO:0003700|GO:0006351|GO:0009742
Ahy12g1874 383 SUPERFAMILY DNase I-like 10 132 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1874 Ahy-Chr12 99663522 99683239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1874 133 383 BZR Transcription Factor Family AT1G75080 53.788 5.15e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Ahy12g1874 BES1_N 5.60E-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1874 K14503 - pop:7478010 372.089