Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1844 ATGACTAAGAAGATTGAAGCAGCCTCTAAGTATTCTACTGTTGACACACTGAAGCAGCAATATCGTTTCTTACCTGCCAAACAAGATGCTGAGAAGGATTTCTACCTTGTGTACATTCTCACTGAAATGGCTGGAAGTACATCAATGGTGTTCACTCGTACATGTGATTCAACTCGTCTTCTTGCTTTGATTCTTAGTAATCTTGGTCTAAAAGCCATCCCAATTAATGGTCATATGACCCAGTCAAAAAGGCTTGGAGCCTTGAATTTATTCAAGTCTGGGGCTCGCAATATTCTCATTTGTACTGATGTAGCTAGTAGAGGATTGGATATTCCAATAGTAGATGTTGTGATTAACTATGACATCCCCACAAACTCCAAAACTAAACCTAAATTGCTGGATTCCTTATCTTGTGCTCTAAGGACTGCTCGTGCAGGGCGTTCTGGGGTTGCAATTTCCCTTGTGAACCAATATGAGCTGGAGTGGTACATTCAAATAGAGAAACTTATAGGCAAGAAGCTACCAGAATATCCTGCACAAGAAGAGGAAGTTCTACTTTTGGAAGAGCGGGTTAGCGAGGCCAAACGATTATCAGTAATGAAAATGAAGGAGGAAGCCATGGGGAAGAAGAAACGGAGAGGTGAATCAGATTATGGCGAAGAAGATATTGACAAATACTTAGGTCTCAAGGATAAGAAATCATCCAAAAAGTTTAGAAGATGA 723 0.4039 MTKKIEAASKYSTVDTLKQQYRFLPAKQDAEKDFYLVYILTEMAGSTSMVFTRTCDSTRLLALILSNLGLKAIPINGHMTQSKRLGALNLFKSGARNILICTDVASRGLDIPIVDVVINYDIPTNSKTKPKLLDSLSCALRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLLLEERVSEAKRLSVMKMKEEAMGKKKRRGESDYGEEDIDKYLGLKDKKSSKKFRR* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1844 240 CDD SF2_C_DEAD 17 155 - -
Ahy12g1844 240 Pfam Helicase conserved C-terminal domain 33 148 IPR001650 -
Ahy12g1844 240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 181 IPR027417 -
Ahy12g1844 240 PANTHER RNA HELICASE 4 221 - -
Ahy12g1844 240 Gene3D - 11 185 IPR027417 -
Ahy12g1844 240 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 35 185 IPR001650 -
Ahy12g1844 240 PANTHER BNAC02G41920D PROTEIN 4 221 - -
Ahy12g1844 240 SMART helicmild6 59 149 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1844 Ahy-Chr12 98597422 98600854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1844 18 178 Eukaryotic Initiation Factors Gene Family AT3G19760 28.571 3.02e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1844 K14777 - gmx:100775796 355.14