Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1840 ATGGCTGAGGAGGGTTTTGAGGGTTACCATGTCCCACAACAAAGCAGAAGAGATAAGCTTAGAGTAGTTGTGGCTCACAACCAACAACACCACCATCAACAAACAACAACACTACTAGAATCTTCTTCCACTCCTCCTACTACTACTACTTCTACTTCTTGGTACGACCCTTCTTCATTCATTCCCTCCGATTTATTAACCTGTGCAGCAGCAACACAACAAGGTCATCACGGTAATTTCCACCTCAACAACGAACCTTCTAAACCCAACAACACCACCAACTTATTCGCCTCTTCTTCTGCAGTGAAGCAGGAAGAACAACAACGTTCTGGTTTGATGATGATGGGGTTTGGTGTAGTAACCGCCATCAACAACGGTTCTTCTTCTTCATCTTCTTCTCCTTCTTCTAACTCCTCTTCCGTTTCCCTTTCCCATCACCATGCTTACATGGATCCACAATCTTCTTCTACTTTGCATTTGAATAACCCGTCAATTCACGTTTTTGGAAACAACAACAACAACAACAACAACAACAACAATAATCCGTTGTTTCTCTACCAGCCACAGAATCTCAGAGATTTCGATAACCATGGCGGTTACGGTGGTGGTGGTGGCAGCGGCGGAGGCGGTGAAATCATGGTGTTCAAGCCTGAACCATTATCTCTATCTCTCTCTTCCCACAACCATAACCATGGTAGTAACAATAACAATCATAACAGCAACAATAACGGCAATAATCTTCCTCTAGAACTGAATCTTCAGCGGTATGGGGCTATGATTTGCGGTGGTGGTGGTGGTGTGATTCCGGGGTTGGTGGTTAACAGTAGTGGTGGGGGTTCTGGTACTTCGAACGAAGTTTCTAGAAGCTGTTCGTCGGTAATGGTGGTACCACAAATGATGGGTCCATTTACGGGTTACGCTTCGGTGTTGAAGGGATCGAGGTTCTTGAAACCAGCACAGCAATTGTTAGAGGAGTTATGTGATGTTGGTGTTGGTGTTGTTGGTGCTGAAGATAAGATCATTGTTGCTGATGCTTCGTTAATGGAACCTCCTCCTACTGCTGCTAGTACTACTACGCCATTAATGGAGTGCTTGAATCATTCTCATCATGAAGATCCTCTATTGCTTGCAGATCAGCATGCTGCTGCTGCTGTTGAGAGTCGCAAGAAGTCAAGGCTCTTAACCATGCTTGATGAGGTTTATAGGAGGTACAGGCAATATTATCAGCAGATGCATGCAGTGGTAACATCGTTCGAGTATGTTTCGGGCCTCACGAATGCAGCTCCATATGCGAGTTTGGCCATAAAGACAATGTCCAAACACTTTAGATGTCTTAAGAATGCAATTACTGACCAGCTTCAGTTCAACAATAAGACTCATTTTCAACTAAGCAACAGGAAAGACGAGTCTCCGAGATTCGGCAACAATGATCGTGGCCCTTACGGCCAAAGGTCAGGATTCATTGAGCACCAACCTGTTTGGAGACCTCAAAGAGGACTCCCTGAGCGCGCCGTGACGGTTCTCAGGGCGTGGTTATTCGAGCACTTTCTGCACCCTTACCCGACCGATACGGACAAATTAATGTTGGCTAAACAAACTGGTTTATCTCGTAGCCAGGTGTCTAACTGGTTTATTAATGCAAGAGTAAGGCTGTGGAAACCAATGGTGGAAGAAATACACATGCTAGAAACCCGGCAAGCTCAGAAAAATACTCAAAGAGAAGAGCATAGTAGGAACAAGTCGAGCGATCCCTTGCCTTCGGATAACACAACGCTTGTTTCAGATAATCCATCGACCTCGGCCGCCGATAAATTTCAGGAGGCACCTTACAAGCGAGCTATGAACGAGCTTCCGAGCATGGCGATTAGGACTCAAGAACAAGTGAATCTTGCATGCCACGGCAACCAGCAAGTTGGCATTGGAGTGAGCATGGGGAGTGCTAGCAATAATGTGTCACTTACACTAGGCCTTCACCAAAATCATGGGATTGGTTTGGCCGAACCGTTTCCATTGAGCGCGGCTCAGCGCTTCGGCCTTGGTCTCGAAACCAATAATGAAGGCTATGTCCTGAGCGGTTTTGAATCGCAAAACCGGCATTTCGGAAGGGATGTTATTGGAGGGCAACTATTGCATGACTTTGTAGGATGA 2148 0.459 MAEEGFEGYHVPQQSRRDKLRVVVAHNQQHHHQQTTTLLESSSTPPTTTTSTSWYDPSSFIPSDLLTCAAATQQGHHGNFHLNNEPSKPNNTTNLFASSSAVKQEEQQRSGLMMMGFGVVTAINNGSSSSSSSPSSNSSSVSLSHHHAYMDPQSSSTLHLNNPSIHVFGNNNNNNNNNNNNPLFLYQPQNLRDFDNHGGYGGGGGSGGGGEIMVFKPEPLSLSLSSHNHNHGSNNNNHNSNNNGNNLPLELNLQRYGAMICGGGGGVIPGLVVNSSGGGSGTSNEVSRSCSSVMVVPQMMGPFTGYASVLKGSRFLKPAQQLLEELCDVGVGVVGAEDKIIVADASLMEPPPTAASTTTPLMECLNHSHHEDPLLLADQHAAAAVESRKKSRLLTMLDEVYRRYRQYYQQMHAVVTSFEYVSGLTNAAPYASLAIKTMSKHFRCLKNAITDQLQFNNKTHFQLSNRKDESPRFGNNDRGPYGQRSGFIEHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAQKNTQREEHSRNKSSDPLPSDNTTLVSDNPSTSAADKFQEAPYKRAMNELPSMAIRTQEQVNLACHGNQQVGIGVSMGSASNNVSLTLGLHQNHGIGLAEPFPLSAAQRFGLGLETNNEGYVLSGFESQNRHFGRDVIGGQLLHDFVG* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1840 715 MobiDBLite consensus disorder prediction 222 246 - -
Ahy12g1840 715 Pfam Associated with HOX 309 450 IPR006563 -
Ahy12g1840 715 CDD homeodomain 494 555 IPR001356 GO:0003677
Ahy12g1840 715 ProSiteProfiles 'Homeobox' domain profile. 491 554 IPR001356 GO:0003677
Ahy12g1840 715 MobiDBLite consensus disorder prediction 28 56 - -
Ahy12g1840 715 MobiDBLite consensus disorder prediction 565 582 - -
Ahy12g1840 715 MobiDBLite consensus disorder prediction 77 109 - -
Ahy12g1840 715 SUPERFAMILY Homeodomain-like 496 561 IPR009057 -
Ahy12g1840 715 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 46 689 - -
Ahy12g1840 715 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 46 689 - -
Ahy12g1840 715 Pfam Homeobox KN domain 511 550 IPR008422 GO:0003677|GO:0006355
Ahy12g1840 715 MobiDBLite consensus disorder prediction 583 603 - -
Ahy12g1840 715 Gene3D - 497 559 - -
Ahy12g1840 715 SMART HOX_1 494 558 IPR001356 GO:0003677
Ahy12g1840 715 MobiDBLite consensus disorder prediction 77 107 - -
Ahy12g1840 715 SMART prehox3 304 451 IPR006563 -
Ahy12g1840 715 MobiDBLite consensus disorder prediction 150 186 - -
Ahy12g1840 715 MobiDBLite consensus disorder prediction 126 145 - -
Ahy12g1840 715 MobiDBLite consensus disorder prediction 565 610 - -
Ahy12g1840 715 MobiDBLite consensus disorder prediction 464 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1840 Ahy-Chr12 98408678 98415109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1840 210 715 Homeobox Transcription Factor Family AT5G02030 46.617 1.17e-122 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Ahy12g1840 POX 2.70E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1840 - - ahf:112727818 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1840 12 98408678 98415109 Ahy12g1840 12 98408678 98415109 ECH