Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1825 ATGCCACTTCCTGATATGATGGCTGCTGTGCTGGCTATGGATGAATCAGTATTAGATGTAGATCAGGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAAGAGATGGAACTTTTGAAGGGATACACTGGTGACAAAGAGAATTTGGGAAAATGCGAACAGGTTACAGAATTTAAGAAGAGTTTAAAAACTGTGAACTCTGCTTGTGAAGAGGTCCGAAAGTCTATCAAGCTGAAGATCATGAAGAAAATTCTTTTTTTTGGGTAA 267 0.3783 MPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKENLGKCEQVTEFKKSLKTVNSACEEVRKSIKLKIMKKILFFG* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1825 88 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 88 - -
Ahy12g1825 88 Pfam Formin Homology 2 Domain 1 54 IPR015425 -
Ahy12g1825 88 Gene3D - 1 65 - -
Ahy12g1825 88 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 88 IPR015425 -
Ahy12g1825 88 PANTHER FORMIN-J 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1825 Ahy-Chr12 97883415 97887686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1825 1 88 FH2 protein (formin) Gene Family AT5G07740 66.379 1.69e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1825 - - ahf:112727809 138.658