Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1804 ATGGCTTCTAATAATCAAGTGCTGCTTCTTGCATTCACACTCACACTCACACTTTTCTTGCAGCTTCTACCATTTCAGATTGAAGGTATTGGTGCAAAAGTTGAAAACCTTCCTGGTTATGATGGACCCCTTCCCTTTCATCTTGAAACCGGGTATATTGGGTTGGGGGATTCAGATGATGACATGCAAGTTTTCTACTATTTTATAAAGTCAGAGAATGATCCTAAGAATGACCCTCTTTTGCTATGGCTCACTGGTGGCCCTGGTTGTTCTTCATTTTCCGGCCTCGTTTATCAAATAGGTCCAATGAAATTCAAAATTGAGGAATTTGATGGGAGCTTGCCTAAGCTCATCCCGAGGCCACAGTCATGGACAAAGGTGGCTAACATTATTTTTGTGGATTTGCCAATGGGAACTGGATTCTCTTACTCCAAAAATGTCCTTCCCCATCGAAGTGACTGGAAGTTTGTTCACCAAACCCATCGATTTATTAGAAAGTGGCTTGCTGAAAACCCGGAATTTCTTTCAAATAAGTTCTACATGGCAGCTGATTCGTACTCCGGCATTCCTGTTCCTCCTATTACTCAAGAGATCGCTGATGGAAATGAAAGAGGTCTCGAACCCCGGATAAATCTCCAGGGATATATACTAGGAAACCCACTAACATCAGGATTAGAAGAGAATGATCGGATCCCATATGTTCACGGAATGGGGCTTATTTCTGATGAACTCTACTGGTCCTTGAAAAAAACTTGTCTTGGCAACATTATAAATGTGGATTCTACAAACAAATTGTGTCTAAATGACTTGCAGTACTATCATGAGCTTCTTGAAAATATTGAGTTGTACAACATTTTGGAGATATATTGTGTTGATGAGAATATCAAAGGAACAAGACGGAACCCCAGGAGATCTCTGGCTCAGAAGATAAAGGCACCTTTGAGTTCTCCGGTCACAGTGCCGGATATGCGCTGCCAAATTTATGGTTTCTTCCTTGGTACGGAATGGATAAATGACCCTGCTGTCCGTAAGGCACTGCATATTCGCGAGGGAACTATAGGGAAATGGAACCGGTGCTATAGTGACGATTATGTATTTGACATCCGTAGCAGCGTTCCGTTTCATGCGAATCTAAGTGCAAAAGGCTACCCTTCCTTGATATACAGTGGGGATCACGATGCAGTAGTTCCTTTCTCGTCGACTCAACGATGGATAAGGTCTCTAAATTACTCCATTGTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATACACGAGGACTTACTCGAATCAAATGACATTTGCAACTATAAGAGGTGCAGGGCATACAGCTCCAGAGAACAAGCCGGACGAAGGTTTTGCCATGTTCGTTAGGTGGATATCTAATAAGCCTCTTTAG 1410 0.4241 MASNNQVLLLAFTLTLTLFLQLLPFQIEGIGAKVENLPGYDGPLPFHLETGYIGLGDSDDDMQVFYYFIKSENDPKNDPLLLWLTGGPGCSSFSGLVYQIGPMKFKIEEFDGSLPKLIPRPQSWTKVANIIFVDLPMGTGFSYSKNVLPHRSDWKFVHQTHRFIRKWLAENPEFLSNKFYMAADSYSGIPVPPITQEIADGNERGLEPRINLQGYILGNPLTSGLEENDRIPYVHGMGLISDELYWSLKKTCLGNIINVDSTNKLCLNDLQYYHELLENIELYNILEIYCVDENIKGTRRNPRRSLAQKIKAPLSSPVTVPDMRCQIYGFFLGTEWINDPAVRKALHIREGTIGKWNRCYSDDYVFDIRSSVPFHANLSAKGYPSLIYSGDHDAVVPFSSTQRWIRSLNYSIVDDWRPWYLNDQVAGYTRTYSNQMTFATIRGAGHTAPENKPDEGFAMFVRWISNKPL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1804 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 466 IPR001563 GO:0004185|GO:0006508
Ahy12g1804 469 SUPERFAMILY alpha/beta-Hydrolases 34 468 IPR029058 -
Ahy12g1804 469 Pfam Serine carboxypeptidase 38 466 IPR001563 GO:0004185|GO:0006508
Ahy12g1804 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Ahy12g1804 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Ahy12g1804 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Ahy12g1804 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Ahy12g1804 469 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 18 466 - -
Ahy12g1804 469 Gene3D alpha/beta hydrolase 35 469 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1804 Ahy-Chr12 97040774 97046453 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1804 336 469 Calmodulin-binding Proteins AT2G22960 64.444 1.32e-54 179