Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1772 ATGAGCTCCACTATGTCACCAGGGATAGGTAGCGAGGCATCGGCTTCACCCCGTCATCGGAGAACCACTGGTCCTATAAGGCGAGCAAATGGTGGTTGGACAGCAGAGGAGGATGAGACATTAAGGAATGCTGTTGCAGCCTTTAAGGGAAAGAGTTGGAAAAAAATAGCTGAGTTTTTCCCTGATAGATCAGATGTTCAATGTCTGCACAGATGGCAAAAAGTTCTTAGTCCAGAACTTGTTAAAGCATCTTGGACTAGGGACTGA 267 0.4644 MSSTMSPGIGSEASASPRHRRTTGPIRRANGGWTAEEDETLRNAVAAFKGKSWKKIAEFFPDRSDVQCLHRWQKVLSPELVKASWTRD* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1772 88 MobiDBLite consensus disorder prediction 1 36 - -
Ahy12g1772 88 CDD SANT 33 76 IPR001005 -
Ahy12g1772 88 Pfam Myb-like DNA-binding domain 31 76 IPR001005 -
Ahy12g1772 88 SUPERFAMILY Homeodomain-like 26 86 IPR009057 -
Ahy12g1772 88 PANTHER MYB PROTEIN-RELATED 4 88 - -
Ahy12g1772 88 PANTHER MYB-RELATED PROTEIN B-LIKE 4 88 - -
Ahy12g1772 88 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 80 IPR017930 -
Ahy12g1772 88 SMART sant 29 78 IPR001005 -
Ahy12g1772 88 ProSiteProfiles Myb-like domain profile. 25 76 IPR001005 -
Ahy12g1772 88 Gene3D - 29 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1772 Ahy-Chr12 95665849 95667222 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1772 2 88 MYB Transcription Factor Family AT3G09370 67.778 3.37e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy12g1772 Myb_DNA-binding 2.40E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1772 K09422 - ahf:112729345 185.267