Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1769 ATGTCCCAAGGGATAGGTAGCCAGGCATCGGCTTCATCCCCTCATCGGAGAACCACCGGTCCTGTAAGGCGAGCAAATGGTGGTTGGACAGCAGAGGAGGATGAGACATTAAGAAATGCTGTTGCAGCCTTTAAGGGAAAGAGTTGGAAAAAAATAGCCGAGTTTTTCCCTGATAGATCAGATGTTCAATGTCTGCACAGATGGCAAAAAGTTCTTAGTCCAGAACTTGTTAAAGCACCTTGGACTAGGGAGTGA 255 0.4706 MSQGIGSQASASSPHRRTTGPVRRANGGWTAEEDETLRNAVAAFKGKSWKKIAEFFPDRSDVQCLHRWQKVLSPELVKAPWTRE* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1769 84 MobiDBLite consensus disorder prediction 1 19 - -
Ahy12g1769 84 SMART sant 25 74 IPR001005 -
Ahy12g1769 84 CDD SANT 29 72 IPR001005 -
Ahy12g1769 84 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 76 IPR017930 -
Ahy12g1769 84 PANTHER MYB-RELATED PROTEIN B-LIKE 10 84 - -
Ahy12g1769 84 ProSiteProfiles Myb-like domain profile. 21 72 IPR001005 -
Ahy12g1769 84 PANTHER MYB PROTEIN-RELATED 10 84 - -
Ahy12g1769 84 Gene3D - 25 78 - -
Ahy12g1769 84 MobiDBLite consensus disorder prediction 1 32 - -
Ahy12g1769 84 Pfam Myb-like DNA-binding domain 27 72 IPR001005 -
Ahy12g1769 84 SUPERFAMILY Homeodomain-like 23 84 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1769 Ahy-Chr12 95560286 95561597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1769 2 84 MYB Transcription Factor Family AT3G09370 67.442 1.37e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy12g1769 Myb_DNA-binding 2.10E-15 CL0123