Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1760 ATGGATATTTCTCATTCCACAACGTCCCAAATATTTCTTGATGGATGCTTCATGAGGTCTGAAAATTATAGCTTCTTTGATGAGTATGCAGGGCCAGGGGACAAGGCTGTTTGTGGAAACAAAACTAGGACGAATTTGAGTTTTCAAGTGGCCGCAAAGCAGGCGATTTTGGAAGTAGTTCAAGCTGCACCAAACAGCATAGGATGCTATGCAAGAGGGAAGGGTCCACCACTGGCTGGAAGGTATGACATGGGAGCTCTATGCATGCATGAGCATTCTGAAAAACTTGAAGGCCTTATCAATGATGCTATAGATAAAGGTTCTGAAATTGTTGCAAGAGGAAGTTTCGGGCCTATTGGTGGAGATGCAGTTAATCAGTATTACCCCTCAACTGTGATTGTTAATAACACTGAAGTTCTCCGGAAGATGGGGAAGCACACAGGGATTAGCTCGGAGTGTGCCGTTCCGACAGATAGCAGGGATTTAATTCCAATTCAAAAATGGAAGTCAATTAACGCTCAGGTGGTTATTGGGACTCCTGGCACCATCAAAAAGTGGATTTCTTTCAAGAATTTGAACCTGACCAGATTGATGATTCTTGTCTTTGATGAGGCTGATCAAATGCTTGCTGAGGATGGTTTTAAGGATGATTCCTTGAGGATAATGAAAGAAATAGAAAAATTCAATTCTAGCTGCCAGGTTCTTCTATTTTCTGCCACATTCAATGACATTGTCAAGAACTTTGTTGAGAGGACAGTTAAAAAGGACCATAATAAACTTTTTGTTAAGAAAGAAGAGCTTTCTTTAGATGCTGTGAAGCATATCTGA 828 0.4094 MDISHSTTSQIFLDGCFMRSENYSFFDEYAGPGDKAVCGNKTRTNLSFQVAAKQAILEVVQAAPNSIGCYARGKGPPLAGRYDMGALCMHEHSEKLEGLINDAIDKGSEIVARGSFGPIGGDAVNQYYPSTVIVNNTEVLRKMGKHTGISSECAVPTDSRDLIPIQKWKSINAQVVIGTPGTIKKWISFKNLNLTRLMILVFDEADQMLAEDGFKDDSLRIMKEIEKFNSSCQVLLFSATFNDIVKNFVERTVKKDHNKLFVKKEELSLDAVKHI* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1760 275 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 138 259 IPR014001 -
Ahy12g1760 275 Pfam DEAD/DEAH box helicase 137 247 IPR011545 GO:0003676|GO:0005524
Ahy12g1760 275 PANTHER DEAD-BOX HELICASE DBP80 135 274 - -
Ahy12g1760 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 254 IPR027417 -
Ahy12g1760 275 Gene3D - 129 271 IPR027417 -
Ahy12g1760 275 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 135 274 - -
Ahy12g1760 275 SMART ultradead3 44 275 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1760 Ahy-Chr12 95134942 95137715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1760 75 143 Aldehyde Dehydrogenase Gene Family AT3G66658 60.870 8.16e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1760 K18655 - aip:107628435 265.003