Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1738 ATGAAGAGTGAAGTGGAAGTTAATGATGCAGGTTTCGGAACCATGGATGATGCTAACAACAACACTAATAAGAACATAGAAGAAGATCTGAGTGAAGTGAATTACGAGTGGCTTCATGAAGATCCAAACTTGTTCTACGACGATTTTCCTCCTCTCCCTGATTTTCCATGCATCTCATCACCACCATCATCGTCATCATCATCATCATCTTTTTCATCATCAAAGCCAGCAGAGAAACCCATCACTGCATGTTCTTCATCTTCCTCTGCTTCTTCATCATCATCATCGTCATGTGCGGCTCTCAAAAAAGACATGCAGAAACCCAACAACACAAACATTACTGAAACAAAAGTACCTTTGCGTTCCACTGCTTCCATGGAGATCTCACAAACCGCCATGGATAGTAATCCACTGTTCCCAAATAACGTTGTTGGTGGTTGCATGGATATGATGGATATGGAAATGGAGCCTTTTGGGTTCATAGACTTCTTAGAAGAGCAAAACAACGCTGATTTCTTTGACCCCGACTCCATTTTCCATCACAACTTTCTCCAAACTGAAAATGAAAGTGAAATCCCATCATTACAACAAAACCAATTCACACAACAACCACCACCAGCACCAGAGGCAGAGGAAGAAGGTGTTACCAACAACAACAGAGAGGAGGGTGAAATGGTAATTCATCACGAGGATGACGGAAACGATGAAATGAGCAATGTGTTCTTGGAATGGCTAAAGACCAACAAGGACAAAATCTCAGCGAGTGATTTGAGAAGTGTGAAGCTGAAGAAATCAACGATCGAATCCGCGGCGAAGCGATTGGGCGGAGGAAAACAAGGGATGAAGCGTTTGCTAAAGCTTATTCTTGAATGGGTTCAAACCAACCACCTCAAGAACAAGAACCCAATTGAATCTTCCTCAAACCCTAATAATTTCTTCAATAAACCTCAATTACCACCACCACCACCACCATGCATTTATGCCTCTCATAATCCTGCTTTAATGGTGCAGTATCCTCCACAACCTGCTTATGTTACTGATGCTGGTGCTGATTATAGCAATAATAAGAATTCATGGCCTAATTCTCAGTTAAATAGTGTTACTACCCATTACAACCTTCCATTTGGGGACAATCATCTTCTCCCTGCGGTTCTTTATGGAAATCAGTACCCTTATCAGTTGTTTTATGGAAATGGAAATGGTGGTGGTGGTGGTGGTGGTGATCATGGATGGCGAAGATTAGGTCCTTTGGCTACCAAAGAAGCTAGGAAGAAGAGGATGGCGAGGCAGAGAAAGTGTTCATCAAATCAGAGGCAGAACAATCACTGGGGCCAGCCACAGAATCAGAGCCAAATTGCTGATACGGGGTGGAAGTCATCAGAGAAGAACTTGAAATTTCTTCTCCAAAAGGTTTTGAAGCAAAGTGATGTTGGTAGCTTGGGAAGGATAGTCTTGCCAAAAAAAGAGGCAGAAACTCATTTGCCAGAATTGGATGCAAGAGATGGAATTTCTATTGACATGGAAGACATTGGAACTTCTCAAGTTTGGAATATGCGCTATAGCATCAGATACTGGCCAAACAATAAAAGCAGGATGTATCTGCTTGAGAACACTGGAGATTTCGTGAAAGCCAATGGACTCCAAGAAGGAGACTTTATAGTGATATATTCAGATGTGAAATGTGGCAAATTTATGATAAGAGGCGTGAAAGTGAGGCAAGCAGGAGGGACGAAATCGGAGACCAAGAAAGCAGCAGGAAAATCACAGAAAAACCAACATACAGTTGTTAATGGTCCAAACAACAATGCTACTTCGTCTTCACGTGATCAGCCGAAAATGAAAATTTAA 1848 0.4194 MKSEVEVNDAGFGTMDDANNNTNKNIEEDLSEVNYEWLHEDPNLFYDDFPPLPDFPCISSPPSSSSSSSSFSSSKPAEKPITACSSSSSASSSSSSSCAALKKDMQKPNNTNITETKVPLRSTASMEISQTAMDSNPLFPNNVVGGCMDMMDMEMEPFGFIDFLEEQNNADFFDPDSIFHHNFLQTENESEIPSLQQNQFTQQPPPAPEAEEEGVTNNNREEGEMVIHHEDDGNDEMSNVFLEWLKTNKDKISASDLRSVKLKKSTIESAAKRLGGGKQGMKRLLKLILEWVQTNHLKNKNPIESSSNPNNFFNKPQLPPPPPPCIYASHNPALMVQYPPQPAYVTDAGADYSNNKNSWPNSQLNSVTTHYNLPFGDNHLLPAVLYGNQYPYQLFYGNGNGGGGGGGDHGWRRLGPLATKEARKKRMARQRKCSSNQRQNNHWGQPQNQSQIADTGWKSSEKNLKFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELDARDGISIDMEDIGTSQVWNMRYSIRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKFMIRGVKVRQAGGTKSETKKAAGKSQKNQHTVVNGPNNNATSSSRDQPKMKI* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1738 615 CDD BfiI_C_EcoRII_N_B3 466 569 - -
Ahy12g1738 615 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 447 607 IPR044800 GO:0003700
Ahy12g1738 615 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 41 451 IPR044800 GO:0003700
Ahy12g1738 615 MobiDBLite consensus disorder prediction 56 121 - -
Ahy12g1738 615 MobiDBLite consensus disorder prediction 59 121 - -
Ahy12g1738 615 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 447 607 - -
Ahy12g1738 615 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 41 451 - -
Ahy12g1738 615 MobiDBLite consensus disorder prediction 433 454 - -
Ahy12g1738 615 MobiDBLite consensus disorder prediction 575 615 - -
Ahy12g1738 615 Gene3D - 442 579 IPR015300 -
Ahy12g1738 615 SUPERFAMILY DNA-binding pseudobarrel domain 467 565 IPR015300 -
Ahy12g1738 615 MobiDBLite consensus disorder prediction 190 218 - -
Ahy12g1738 615 MobiDBLite consensus disorder prediction 425 454 - -
Ahy12g1738 615 SMART B3_2 468 570 IPR003340 GO:0003677
Ahy12g1738 615 ProSiteProfiles B3 DNA-binding domain profile. 468 572 IPR003340 GO:0003677
Ahy12g1738 615 MobiDBLite consensus disorder prediction 190 205 - -
Ahy12g1738 615 MobiDBLite consensus disorder prediction 1 27 - -
Ahy12g1738 615 MobiDBLite consensus disorder prediction 588 615 - -
Ahy12g1738 615 Pfam B3 DNA binding domain 469 567 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1738 Ahy-Chr12 94126888 94131111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1738 456 607 B3 DNA Binding Superfamily AT3G24650 73.418 1.05e-65 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy12g1738 B3 1.50E-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1738 - - aip:107625556 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1738 12 94126888 94131111 Ahy12g1738 12 94126888 94131111 ECH