Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1737 ATGGCTGGAGTTTTGAGGCAAATGTCAATGCCAATGCCAATGCCGAGGCAAGCCTTGAGCCACCACCACCAAATGCCGAGGCAATCTCTCAACCACCTTCTTCTTCTCCATCTCTTCTTACTCTTTCTCACACTAACAAACCTTCCTCTTTCTTCTTCCTCTTCAAACAATAATAATAATGAAGCTCTAGCTTTGCTTTCATGGCTCAAAAACGGTTCCTCCAAAACTCCTTCACCACTCTCAGACTGGAACCTTCTAGACCCTACACCATGCAACTGGTCCTGCGTCAAATGCTCCGTAGACAACCACGTCATAGAGATAAACATTCAAGCTATACAGTTAGCCCTTCCTTTTCCTTCAAACCTCTCTTCTTCCCTTCCCTTCCTTCGAAAACTCGTCATCTCCGGTGCCAATCTCACCGGACCAATCTCCCCGGATATTGGATACTTCGCTTCGCTTTCCGTTCTTGATCTCAGCTCAAATGCTCTTGTTGGTTCCATTCCTTCAACCATTGGAAACCTCAAGAACCTTCAAGACTTAACATTAAACTCAAACCAGCTCACAGGTCCAATCCCAAAGGAGATTGGTGACTGTGTTAGCCTCAAGAATCTCAATGTTTTCGATAATAGCCTCAGCGGCGAGCTTCCAGTTGAGCTTGGAAGCCTTTTGAATCTTGAAAAGATAAGAGCTGGAGGGAACAAGGACATTGTTGGGAAGATTCCTGAAGCTATTGGTAACTGCAATAATCTAACCATTTTAGGCCTTGCAGATACCAAGGTTTCGGGTTCGTTACCTTCTTCGTTGGGAAAACTATCCATGCTTCAAACTATCTCAATTTATAGTACTATGCTTTCCGGTGAGATTCCAGCTGAGATTGGAAACTGTTCTGAGCTTGTGAACTTGTTTCTTTATGAGAACGATCTCTCCGGTTCCATTCCGAAGGAGTTAGGGAAGCTCCAGAAGCTTGAAAAGATGCTGCTATGGCAGAACAGTTTCTTAGGCAGCATACCCGAAGAAATTGGAAGCTGCATAAGCTTGAAGATTCTTGATGTCTCCTTGAACTCTCTGTCAGGAACAATACCGCGAAGTTTGGGGAATCTTTCGAACCTCGAAGAGCTTATGCTGAGTAACAACAACATTTCAGGCTCAATTCCTGAAGTCCTTTCAAACTTGACGAACCTTGTTCAGTTGCAGTTAGATACAAATGAGATTTCCGGTTCAATTCCACCGGAGATCGGAAAACTAGAGATGCTTGAAGTTTTTTTTGCATGGCAGAACAAGCTCGAAGGAGCGATTCCTTTGGCGTTAGGCGGTTGTAGAAGCCTTCAAGCTTTGGATTTATCATACAATTCACTCACTGGTGGATTACCTCCAAGTTTGTTTCAGCTTCAGAACTTAACAAAGCTTCTCCTTATCTCGAACGAAATCTCCGGCCGAATTCCGGCGGAGATTGGTAACTGCAGCTCCCTTGTTCGCCTCCGGCTCGTTAAAAACAGAATCACAGGCCAGATTCCAAGTGAAATTGGATTCCTTAACAACCTCAGCTTCCTTGATCTCTCTGAAAATCATCTTACAGGGTTAGTACCAGAGAATATCGGTAACTGCAAGGAACTTCAAATGCTCAACCTTAGCAATAACTCGCTTTCCGGCGCTTTGCCGAGTTCTTTATCCTCTCTTACAAGGATTGAAGTCATGGATGTGTCGATGAACAATTTCTCCGGCGAGTTTTTGATGAACATTGGCGAACTGGCTTCTCTGCTTAGAATCATTGTTAGGCAAAATTCGTTCTCCGGATCGATTCCCTCTTCGATTGGACGGTGTTCTGGTCTTCAGCTTTTAGACCTTAGCAGCAACAAATTCTCAGGAAGCATACCAGAAGAACTATTCGAAATCGAAGCGCTAGACATTGCTCTTAACTTGAGTCACAATGCATTGTCTGGAATAGTTCCGCCTCAGATTTCGGCTTTGAATAAGTTGTCTATTTTGGACATTTCGCATAATTTGCTTGAAGGAGACTTGTTAGCATTTGCAGGGCTTCAAAATCTTGTTTCTATGAATATCTCATACAATAAATTCTCCGGTTATTTACCGGACAGCAAGCTATTCCGCCAGTTATTGCCGACCGATTTCGAAGGGAATCAAGGCTTGTGTCCCAACGGCCATGATTCTTGCTTCATCACTAATGCTGCAATGACAACAATGCTGCATAGTACTAATTCCAAGAGGTCACAGAGAATCAAACTCGCAATCGGACTTCTAAGCGCTTTGATTGTTGCATTGGCAATGTTTGGAATCGCGACAATCATTCGAGCGAGGAAAGTTGCTCAAGATGGCAATGATTCTGAGATTGGAGGAAACTCGTTGCCGTGGCACTTTACGCCGTTCCAAAAGCTAAATTTCTCGGTTGATCAAGTCTTGAAGTGTTTGGTAGAGTCCAACATAATTGGAAAGGGATGTTCAGGAGTTGTTTACAAAGCCGAAATGGAAAACGGCGATGTCATCGCTGTGAAGAAGCTCTGGCCAACAACAATGGCTTCAAGATATGACTGCCAAAGTGACAAGCCGGCGAGTAACTGTGGAGTTCGCGATTCCTTCTCGGCCGAGGTGAAGACACTCGGCTCGATTCGCCACAAGAACATAGTGAGGTTCTTGGGCTGCAGCTGGAACAGAAACACAAGATTGCTCATGTATGACTATATGCCTAATGGGAGTCTTGGAAATCTACTCCATGAAAGAAGTAACTGCCTGGAATGGGATATCAGATACCGGATTATACTCGGCGCGGCACAGGGCTTGGCTTACTTGCATCATGATTGTGTTCCTCCCATTGTTCATAGGGACATCAAGGCCAATAATATCCTCATAGGCCCTGAATTTGAACCATATATAGCTGATTTTGGACTCGCCAAGCTCGTGGATGATGGCGATTTCGCACGATCTTCTAGTACATTGGCTGGTTCCTATGGCTACATTGCTCCTGAGTATGGCTACATGATGAAAATAACAGAGAAAAGTGATGTCTACAGCTATGGTGTTGTTGTACTAGAAGTACTAACAGGGAAGCAACCAATTGATCCAACAATACCAGAAGGAGTCCACATTGTTGATTGGGTGAGACAAAAGAGAGGCGGAAAGGAAGTCCTCGACGAGAGCCTTCGTGTCCGGCCGGAATCCGAACTTGAGGAGATTCTGCAGACATTAGGTGTGGCTTTCTTGTGTGTTAATCCAAGCCCTGATGACAGGCCAACCATGAAAGATGTAGCAGCAATGCTTAAAGAAATTAGGCAAGAAAGAGGAGAGTATATGAAAGTTGACATGATTCTGAATGGATCTTCAGCAAATGATCAACAAGGAAGCAGTAATCATTCACACACATACCCAATTAGTAGCAGCAGCAACACAAATTTTTCTGCATCTATGTTTATTTCTCCATCATCATCCAATAGTAAAGTTACTTTCAAATAG 3465 0.439 MAGVLRQMSMPMPMPRQALSHHHQMPRQSLNHLLLLHLFLLFLTLTNLPLSSSSSNNNNNEALALLSWLKNGSSKTPSPLSDWNLLDPTPCNWSCVKCSVDNHVIEINIQAIQLALPFPSNLSSSLPFLRKLVISGANLTGPISPDIGYFASLSVLDLSSNALVGSIPSTIGNLKNLQDLTLNSNQLTGPIPKEIGDCVSLKNLNVFDNSLSGELPVELGSLLNLEKIRAGGNKDIVGKIPEAIGNCNNLTILGLADTKVSGSLPSSLGKLSMLQTISIYSTMLSGEIPAEIGNCSELVNLFLYENDLSGSIPKELGKLQKLEKMLLWQNSFLGSIPEEIGSCISLKILDVSLNSLSGTIPRSLGNLSNLEELMLSNNNISGSIPEVLSNLTNLVQLQLDTNEISGSIPPEIGKLEMLEVFFAWQNKLEGAIPLALGGCRSLQALDLSYNSLTGGLPPSLFQLQNLTKLLLISNEISGRIPAEIGNCSSLVRLRLVKNRITGQIPSEIGFLNNLSFLDLSENHLTGLVPENIGNCKELQMLNLSNNSLSGALPSSLSSLTRIEVMDVSMNNFSGEFLMNIGELASLLRIIVRQNSFSGSIPSSIGRCSGLQLLDLSSNKFSGSIPEELFEIEALDIALNLSHNALSGIVPPQISALNKLSILDISHNLLEGDLLAFAGLQNLVSMNISYNKFSGYLPDSKLFRQLLPTDFEGNQGLCPNGHDSCFITNAAMTTMLHSTNSKRSQRIKLAIGLLSALIVALAMFGIATIIRARKVAQDGNDSEIGGNSLPWHFTPFQKLNFSVDQVLKCLVESNIIGKGCSGVVYKAEMENGDVIAVKKLWPTTMASRYDCQSDKPASNCGVRDSFSAEVKTLGSIRHKNIVRFLGCSWNRNTRLLMYDYMPNGSLGNLLHERSNCLEWDIRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGVHIVDWVRQKRGGKEVLDESLRVRPESELEEILQTLGVAFLCVNPSPDDRPTMKDVAAMLKEIRQERGEYMKVDMILNGSSANDQQGSSNHSHTYPISSSSNTNFSASMFISPSSSNSKVTFK* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1737 1154 SUPERFAMILY L domain-like 458 717 - -
Ahy12g1737 1154 ProSiteProfiles Leucine-rich repeat profile. 369 392 IPR001611 GO:0005515
Ahy12g1737 1154 Pfam Protein kinase domain 811 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1737 1154 ProSiteProfiles Protein kinase domain profile. 809 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1737 1154 ProSitePatterns Protein kinases ATP-binding region signature. 815 838 IPR017441 GO:0005524
Ahy12g1737 1154 Gene3D Transferase(Phosphotransferase) domain 1 900 1113 - -
Ahy12g1737 1154 ProSitePatterns Serine/Threonine protein kinases active-site signature. 943 955 IPR008271 GO:0004672|GO:0006468
Ahy12g1737 1154 Pfam Leucine rich repeat 345 404 IPR001611 GO:0005515
Ahy12g1737 1154 Pfam Leucine rich repeat 513 572 IPR001611 GO:0005515
Ahy12g1737 1154 Pfam Leucine rich repeat 152 211 IPR001611 GO:0005515
Ahy12g1737 1154 Gene3D Ribonuclease Inhibitor 60 171 IPR032675 -
Ahy12g1737 1154 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 28 1114 - -
Ahy12g1737 1154 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 28 1114 - -
Ahy12g1737 1154 SUPERFAMILY L domain-like 237 529 - -
Ahy12g1737 1154 Gene3D Ribonuclease Inhibitor 262 359 IPR032675 -
Ahy12g1737 1154 Gene3D Phosphorylase Kinase; domain 1 794 899 - -
Ahy12g1737 1154 SUPERFAMILY Protein kinase-like (PK-like) 799 1091 IPR011009 -
Ahy12g1737 1154 Gene3D Ribonuclease Inhibitor 637 724 IPR032675 -
Ahy12g1737 1154 SMART LRR_typ_2 607 631 IPR003591 -
Ahy12g1737 1154 SMART LRR_typ_2 319 343 IPR003591 -
Ahy12g1737 1154 SMART LRR_typ_2 150 173 IPR003591 -
Ahy12g1737 1154 SMART LRR_typ_2 174 198 IPR003591 -
Ahy12g1737 1154 SMART LRR_typ_2 511 535 IPR003591 -
Ahy12g1737 1154 SMART LRR_typ_2 391 415 IPR003591 -
Ahy12g1737 1154 SMART LRR_typ_2 439 463 IPR003591 -
Ahy12g1737 1154 SMART LRR_typ_2 679 704 IPR003591 -
Ahy12g1737 1154 SMART LRR_typ_2 367 390 IPR003591 -
Ahy12g1737 1154 Gene3D Ribonuclease Inhibitor 552 636 IPR032675 -
Ahy12g1737 1154 Gene3D Ribonuclease Inhibitor 360 453 IPR032675 -
Ahy12g1737 1154 Gene3D Ribonuclease Inhibitor 454 551 IPR032675 -
Ahy12g1737 1154 SMART serkin_6 809 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1737 1154 PRINTS Leucine-rich repeat signature 514 527 - -
Ahy12g1737 1154 PRINTS Leucine-rich repeat signature 656 669 - -
Ahy12g1737 1154 Pfam Leucine rich repeat N-terminal domain 59 99 IPR013210 -
Ahy12g1737 1154 MobiDBLite consensus disorder prediction 1110 1133 - -
Ahy12g1737 1154 SUPERFAMILY L domain-like 77 306 - -
Ahy12g1737 1154 Gene3D Ribonuclease Inhibitor 172 261 IPR032675 -
Ahy12g1737 1154 Pfam Leucine Rich Repeat 441 460 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1737 Ahy-Chr12 94086528 94091245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1737 59 1126 Receptor kinase-like Gene Family AT5G56040 47.123 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy12g1737 Pkinase 5.20E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1737 - - gmx:100794698 1641.71