Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1736 ATGACAAAGATGTATCAATTTCTTGTGCAACGTTCAAGGCCTTTTCTTTCACAAAGATTTTTCTCTCAGTTTTCTTGGGCATCATCGTCATTATCACCACCTCTCACTAACAACATGTCCACCACTTCTGGTCTCGTCATTCCCTGCAAAGCTGCTGTTGCATGGGAAGCAGGGAAACCACTGGTGATAGAAAAAGTGGAGGTGGCTCCGCCACAGGCCATGGAAGTGAGGATCAAGGTTAAATATACCTCACTCTGCCATACTGATCTCTACTTCTGGGAGGCCAAGGGACAAACTCCACTGTTTCCCCGAATTTTCGGCCACGAGGCTGCTGGAATTGTGGAGAGTGTTGGAGAAGGAGTCACAGACTTGCATGTTGGGGATCATGTGCTTCCAGTATTCACCGGTGAATGTGGTGAATGCGCTCATTGCAAATCCGAGGAAAGCAACATGTGTGACCTCCTGAGAATAGATACAGAGAGAGGAGTCATGCATAGTGATGGTAAAAGCAGGTTTTCCATTAATGGTACGCCAATAAACCACTTTGTTGGCACGTCCACATTTAGTGAATACACTGTGATACATTCTGGATGCTTGGCAAAGCTCAATCCACTGGCACCAATGGATAAAGTATGTGTCCTCAGTTGTGGTATCTCAACAGGATTGGGAGCAACTTTGAATGTAGCAAAACCAAAGAAGGGTTCTACAGTGGCAGTGTTTGGTCTTGGAGCTGTTGGACTTGCTGCTGCTGAGGGTGCCCGAATTGCTGGTGCATCTAGAATTATTGGAATTGATTTGAACCCAAACAGGTTTGAAGAAGCAAAAAAATTTGGAATAACCGATTTTGTGAATCCACAGGACTATGATAGGCCAGTTCAACAGGTGATTGCGGAAATGACCAATGGAGGAGTCGACCGAAGTATAGAGTGCACTGGAAACATTAACGCAATGATATCTGCTTTTGAATGTGTTCATGACGGATGGGGTGTTGCTGTGCTTGTTGGAGTTCCAACTAAGGATGCAGTTTTCATGACCAAGCCCATTAATTTGCTCAACGAAAGAACACTAAAAGGAACTTTCTTTGGAAATTACAAGCCCAGAACTGATCTTCCATCTGTGGTCGATATGTATATGAACAAGAAATTGGAATTGGACAAGTTTATAACCCACAGAGTTCCTTTCTCTGAAATCAACAAGGCATTTGATCTAATGTTGAGAGGGGAGGGACTAAGGTGTATCATTAGTATGGAAGACTAA 1257 0.4383 MTKMYQFLVQRSRPFLSQRFFSQFSWASSSLSPPLTNNMSTTSGLVIPCKAAVAWEAGKPLVIEKVEVAPPQAMEVRIKVKYTSLCHTDLYFWEAKGQTPLFPRIFGHEAAGIVESVGEGVTDLHVGDHVLPVFTGECGECAHCKSEESNMCDLLRIDTERGVMHSDGKSRFSINGTPINHFVGTSTFSEYTVIHSGCLAKLNPLAPMDKVCVLSCGISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARIAGASRIIGIDLNPNRFEEAKKFGITDFVNPQDYDRPVQQVIAEMTNGGVDRSIECTGNINAMISAFECVHDGWGVAVLVGVPTKDAVFMTKPINLLNERTLKGTFFGNYKPRTDLPSVVDMYMNKKLELDKFITHRVPFSEINKAFDLMLRGEGLRCIISMED* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1736 418 CDD alcohol_DH_plants 47 414 - -
Ahy12g1736 418 Gene3D - 221 359 - -
Ahy12g1736 418 PANTHER ALCOHOL DEHYDROGENASE 41 416 - -
Ahy12g1736 418 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 107 121 IPR002328 GO:0008270|GO:0016491
Ahy12g1736 418 SUPERFAMILY GroES-like 366 414 IPR011032 -
Ahy12g1736 418 Pfam Alcohol dehydrogenase GroES-like domain 75 199 IPR013154 -
Ahy12g1736 418 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 207 381 IPR036291 -
Ahy12g1736 418 Pfam Zinc-binding dehydrogenase 244 374 IPR013149 -
Ahy12g1736 418 Gene3D - 57 408 - -
Ahy12g1736 418 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 41 416 - -
Ahy12g1736 418 SUPERFAMILY GroES-like 42 224 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1736 Ahy-Chr12 94069095 94073805 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1736 75 408 Monolignol Biosynthesis Gene Families AT1G72680 22.714 7.74e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1736 K18857 - egr:104426870 687.952