Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1731 ATGCATAGTCTTCAGAAGCAACGAAGTTTATTATTTCAGTACCTGCGTTCATCACCAAACAGCAACAATATTATTCATAATTATTCAAAAATGATTCTTTCATCATCTTCTTCTTTATTATTAGCCTCTAACTTTTCTTCCACTGCAGGCAAGGTCATTCCTTGCAAAGCTGCAGTTGCATGGGAAGCAGGGAAGCCATTGGTGATTGAAGATGTGGAGGTTGCTCCACCACAAGCCAAAGAAGTAAGGATTAACATCAAATATTCATCACTTTGCCACACTGATCTATACTTCTGGGAATCTAAGTGCGTACCACCAATATTTCCACGCATATTAGGACACGAAGCATCTGGGATTGTGGAGAGTGTAGGAGATGGTGTATCAAATCTCAAGCCTGGTGATCATGTTCTTCCACTGTTCACTGGAGAGTGTGGGGAATGCCCACACTGCAAGAGTGAAGATAGCAACATGTGTGAGGTGTTGCGAATAAACCCAACAAGAGAGGGTATGATAAGTGACGGAAAATCAAGGTTCTCTACTATAAAAGGCAAGGAACCTATAAGTCACTTCCTTGGCACATCCACTTTTAGCCAATACACAGTTGTTCATTCAGGAAGTGTTGTTAAGATCAATCCCACACTTCCTTTGGACAAAGCTTGTCTCCTCAGTTGTGGCATCTCAACAGGAATAGGATCAATTCTCAATGTTGCCAAACCAAAGAAGGGGGCTTCAATAGCAATATTTGGGCTTGGAACTGTTGGACTGGCTGCAGCCGAAGGTGCAAAAATTGCTGGAGCATCCAGGATAATTGGAATTGACAAGAATCCCAACAAACTTGAGTATGCCATGAAATTTGGACTAACAGACTTCGTAAATCCAGAAGAACATGAAAGACCAGTTCATGAGGTCCTCAAAGAGATGACAAATGGTGGAGTTGATAGGTGCATAGAATGCACTGGAAACATTAATGCCTTAATGTCTGCAATGGAAGCTCTCCATGATGGATGGGGTGTTGCTGTACTTGTCGGAGTGCCTAGTGGTGATGCAGTTTTCAAGACTAATCCCTTCAATTTTCTTAATGAAAAGACAATTACAGGCACAACCTTTGGGAACTACAAGCCTAAGACTGGCCTACCAACACTAGTTGATATGTTCATGAACAACAAATTGGAGCTGGGCAAGTTTATAACTCATAGAGTTCCTCTTTCTGAAATCAATAAAGCCTTTGATTACATGATCAAAGGACAAGGTCTAAGGACAATCATAGACATGAACGACTAG 1281 0.4137 MHSLQKQRSLLFQYLRSSPNSNNIIHNYSKMILSSSSSLLLASNFSSTAGKVIPCKAAVAWEAGKPLVIEDVEVAPPQAKEVRINIKYSSLCHTDLYFWESKCVPPIFPRILGHEASGIVESVGDGVSNLKPGDHVLPLFTGECGECPHCKSEDSNMCEVLRINPTREGMISDGKSRFSTIKGKEPISHFLGTSTFSQYTVVHSGSVVKINPTLPLDKACLLSCGISTGIGSILNVAKPKKGASIAIFGLGTVGLAAAEGAKIAGASRIIGIDKNPNKLEYAMKFGLTDFVNPEEHERPVHEVLKEMTNGGVDRCIECTGNINALMSAMEALHDGWGVAVLVGVPSGDAVFKTNPFNFLNEKTITGTTFGNYKPKTGLPTLVDMFMNNKLELGKFITHRVPLSEINKAFDYMIKGQGLRTIIDMND* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1731 426 PANTHER ALCOHOL DEHYDROGENASE 47 424 - -
Ahy12g1731 426 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 113 127 IPR002328 GO:0008270|GO:0016491
Ahy12g1731 426 Pfam Alcohol dehydrogenase GroES-like domain 80 210 IPR013154 -
Ahy12g1731 426 SUPERFAMILY GroES-like 375 422 IPR011032 -
Ahy12g1731 426 SMART PKS_ER_names_mod 64 422 IPR020843 GO:0016491
Ahy12g1731 426 Pfam Zinc-binding dehydrogenase 253 372 IPR013149 -
Ahy12g1731 426 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 47 424 - -
Ahy12g1731 426 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 214 389 IPR036291 -
Ahy12g1731 426 SUPERFAMILY GroES-like 48 232 IPR011032 -
Ahy12g1731 426 Gene3D - 229 367 - -
Ahy12g1731 426 Gene3D - 63 416 - -
Ahy12g1731 426 CDD alcohol_DH_plants 53 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1731 Ahy-Chr12 93906526 93939664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1731 81 426 Monolignol Biosynthesis Gene Families AT1G72680 25.356 6.68e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1731 K18857 - nnu:104602143 587.8