Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1721 ATGGCTTCTTCAAGCATGGAAGGATCAATGCCCACCATGGACGAATATGAGGCTCTCTTGTCAACCACCGACGTCGAACTTCTCAAGAGAGCATGGCGTAGCGAGAAGGCTGCTCCCGAGATTCTCCGCTACGATTTCGATCTCGTTGGCCGCGTCACCGAACAGCTTCAATTGATGATGGACTTGGATAGGACCCTCTTTCTCTTGAGATCATATCTTCGGATCCGCATACAGAAGATTGAAAAATACATGTTCCACATTCGAAAAAGTGACGAGCTATGGAATAGGTTATCTAAAGGGGAGAAAGATTTCGCTTCAAGGTGCATAGATGACCTAAAACAACATCTCGAGGAGAGTGTTCTTTCGAAATTGCCTGAAAATTATCAATCCGTTGAGAAGCAATCTGTAATAAGTGAAGAGGATGACATGGTCCCAGAACCACGCCTAGACACATTCGTCTTATGTAGAAGCAAAGAGTATCTCTCTGGCATTCAACTTGAAGATGGACCTGTTGATGACAGGTCGAAGCTCTTTGAGATGGAGCCGGGTGTCCTTTACTTCATATGTTACAAATCAATAAAGCCACTTGTGGAGAGTGGGAAAATTGATCTTCTCTGA 618 0.445 MASSSMEGSMPTMDEYEALLSTTDVELLKRAWRSEKAAPEILRYDFDLVGRVTEQLQLMMDLDRTLFLLRSYLRIRIQKIEKYMFHIRKSDELWNRLSKGEKDFASRCIDDLKQHLEESVLSKLPENYQSVEKQSVISEEDDMVPEPRLDTFVLCRSKEYLSGIQLEDGPVDDRSKLFEMEPGVLYFICYKSIKPLVESGKIDLL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1721 205 PIRSF GINS_Sld5 2 60 IPR008591 GO:0006261
Ahy12g1721 205 PIRSF GINS_Sld5 57 205 IPR008591 GO:0006261
Ahy12g1721 205 SUPERFAMILY GINS helical bundle-like 21 135 IPR036224 -
Ahy12g1721 205 Pfam DNA replication complex GINS protein SLD5 C-terminus 147 205 IPR031633 -
Ahy12g1721 205 PANTHER SLD5 PROTEIN 9 59 IPR008591 GO:0006261
Ahy12g1721 205 PANTHER SLD5 PROTEIN 60 205 IPR008591 GO:0006261
Ahy12g1721 205 Gene3D - 12 195 - -
Ahy12g1721 205 SUPERFAMILY PriA/YqbF domain 149 205 - -
Ahy12g1721 205 CDD GINS_A_Sld5 24 121 IPR038749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1721 Ahy-Chr12 93316361 93319678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1721 1 152 Core DNA Replication Machinery Family AT5G49010 54.913 3.52e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1721 K10735 - gmx:100784291 306.605