Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1687 ATGATGCCTAAACTTGATATTGTGTCTATTAAGGTAATGGTAAAGCCATCGTCTCCAACCCCTAATCACCTTAGAGATTTCAAAATCTCCCTCGTTGATGAGATGGCTCCTCCAATCTATATTCCCATAATTTTATTCTACTCAGCCACTGATATTAATAGTTCCTTTGGAACTCATGATGTCGAGACCATATCCAATAAATTAAAGGTTTCTTTATCCAAAGTTCTCACTCTATATTACCCATTCTGTGGAAGATTCAAATGTACCTCACCATCCTCTGTTGATTGTAATGATGAAGGTGTACCTTACATCGAGTGTAAATTCCCCACTAACCTTGTAGATATTCTCAAAAGGCCTCAATCCCAAATGCAGGAGCTTTTGCCATTTGACCCATATAATAATGTTTCTAGTAGTTTGGATCAAAATGATGACAAACACAAAGTGACCATGGCGGTTCAGTTGAGTGAATTCAAGTGTGGGGGTATTGCACTTGGTGTGTGCCTCTCACACAGGGTAGCAGATGGCGAAGCAACATCATCATTCCTCAATGCTTGGGCTAAAACTGCAAAGGGTCTTTTCAACCAAGTAGACCCACCTCAAATGGATGCAGCTTTGAGTTTCCCTCCACGGGGAATAGAATGGGCCATCACTAGTCTCATGGTCGGTGGTGGCAATGAAAAACTCGTGACCAAGTGTTTCTTGTTTAGTCCAACGGACTTGTCCAGATTGAGAGCTAGATTTGGAAGCTTTAATCCGACTCGCGTCGAAGCTGTCACAGCACTCATATGGAAATCAGCAATTCAAGTAGCAAAAGGAAGTTCTTCTGGGGAGTGTAACAGAACCTGTTACAAGGCTTCTATGGTGTGCCATGCCGTCGACATTCGTAATCGAATGGTGCCACCGTTGCCAAAAAACTTGTTTGGCAATCTTTGGCTTTATTCTATTTCTGAATTGGTGGATTTGGGTGACGGAGGTTATGGAACAGAAGAGTTGTGTGATTTGGTGGGGATGGTTAGGAATGCTATTAGAGAAACTAGTGCGGGTTATTCAGATATGCTGCTTCAAGGTGACGGTTTGGATGAGTTCGATGAATTCTTCAAGGAAGCAAGATTAAGGGTCGCTGAAAATCTTGTTGCATGCTGTGGATTTAGTAGTTGGACAAGATTTGGTTTCTATGAAGTTGATTTTGGATGGGGGAAGCCAATTAAGGTGAGAAACATTAATTTGCCTATGAAGAATGTGACATATTTGATTCCTACAAGAACTGGGGATGGCATAGAGGCATGGGTAACCATGACCGAGCTTGATATGGATGAATTCCAGCGTAACTCCGAGCTTCTCCAGTTTGCCTTGCTGGAATCTTAA 1365 0.4212 MMPKLDIVSIKVMVKPSSPTPNHLRDFKISLVDEMAPPIYIPIILFYSATDINSSFGTHDVETISNKLKVSLSKVLTLYYPFCGRFKCTSPSSVDCNDEGVPYIECKFPTNLVDILKRPQSQMQELLPFDPYNNVSSSLDQNDDKHKVTMAVQLSEFKCGGIALGVCLSHRVADGEATSSFLNAWAKTAKGLFNQVDPPQMDAALSFPPRGIEWAITSLMVGGGNEKLVTKCFLFSPTDLSRLRARFGSFNPTRVEAVTALIWKSAIQVAKGSSSGECNRTCYKASMVCHAVDIRNRMVPPLPKNLFGNLWLYSISELVDLGDGGYGTEELCDLVGMVRNAIRETSAGYSDMLLQGDGLDEFDEFFKEARLRVAENLVACCGFSSWTRFGFYEVDFGWGKPIKVRNINLPMKNVTYLIPTRTGDGIEAWVTMTELDMDEFQRNSELLQFALLES* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1687 454 PANTHER N-BENZOYLTRANSFERASE PROTEIN, PUTATIVE-RELATED 7 450 - -
Ahy12g1687 454 Gene3D - 225 449 IPR023213 -
Ahy12g1687 454 Gene3D - 4 213 IPR023213 -
Ahy12g1687 454 Pfam Transferase family 11 446 - -
Ahy12g1687 454 PANTHER F21J9.9 7 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1687 Ahy-Chr12 91660787 91662151 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1687 12 442 Monolignol Biosynthesis Gene Families AT5G48930 26.797 8.80e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1687 - K13065 gmx:100792323 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1687 12 91660787 91662151 Ahy2g1444 2 76501608 76502945 hybridization