Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1672 TGGAACCAAATGGACGGATTGTTTGTGCCTAGAAACAACATTAAAGAGGCTATACTTCTTTTAATGATTTTGCTTAGAAAAGTCACTCTAAATAGAATTGAGTGGGATCCTTCAATTTTGGACCACCTTTCATTTGCTCTATCTGATTCTGGAAATTTGATGATTTTAGCCAATCAATTGGAAGAATTGCTTCCTGGAACTATCCATCGAAAGGAGAGGTTCTATGCTTTAGCTCTTTGTTATTACGAAGCAGGGAAGAATGTGGAAGCGCTGGATCTTCTTAGAAAACTGCTGAGTAATAGAGAGGACCCAAGACATGTTCCAAGTTTGTTAATGGCTTCTAAGATTTGTTGCGAGAACTTCAGTGTTACAAAAGACCCTGGGGTAAGCTTTGCTCGGATGGCACTTGAGAACTTGGATGGAAGATGTAATCAGTTAGAAAATATGGCCAATTTCTTACTTGGTGTTTCACTTTCTGCATACTCGAAATTGGCCATTTCTGATGCTGAGAGGGTTAAGAGACAATCTGAGGCACTTCATACCCTTGAAACTGCCTGCAAATTGAGCAGAATGGAAGACCCTGTTGTATTATACCATCTGAGTTTAGAATACGCTGAGCAACGGAAGTTGGATGCTACACTTCATTATGCTAAGTGCATTGTAAAACTTGAAGTTGGCTCTAATGTTAAAGGTTGGTTACTGTTATCTAGTGTATTATCCGCACAAAAGCGGTTCTTAGATGCCGAATCTATTATCAATGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGTGATTTGTTACGAACAAAGGCGAAACTTCAGATCGCTCAGGGCCAGTTAAAGAGTGCCATTGAGACATACACTCAGCTTCTTGCTGTTCTTCAAGTTCATAGTAAAAGTTTTGGTTCTCGGAATAAGCTATTTAAGGACAAAAGAGATCAGATTAGGAATTTGGAAGTTGAAGTATGGCATGATCTTGCTTATGTATACATCAGCCTTTCACAGTGGCGTGACGCAGAGGCCTGCCTTTCAAAATCTCGGGCCACCAAACTATACTCTTCTACTAGATGTCATGCAATAGGGTAA 1089 0.4013 WNQMDGLFVPRNNIKEAILLLMILLRKVTLNRIEWDPSILDHLSFALSDSGNLMILANQLEELLPGTIHRKERFYALALCYYEAGKNVEALDLLRKLLSNREDPRHVPSLLMASKICCENFSVTKDPGVSFARMALENLDGRCNQLENMANFLLGVSLSAYSKLAISDAERVKRQSEALHTLETACKLSRMEDPVVLYHLSLEYAEQRKLDATLHYAKCIVKLEVGSNVKGWLLLSSVLSAQKRFLDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLKSAIETYTQLLAVLQVHSKSFGSRNKLFKDKRDQIRNLEVEVWHDLAYVYISLSQWRDAEACLSKSRATKLYSSTRCHAIG* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1672 362 Gene3D Tetratricopeptide repeat domain 11 355 IPR011990 GO:0005515
Ahy12g1672 362 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 3 362 - -
Ahy12g1672 362 PANTHER PROTEIN NPG1 3 362 IPR043376 -
Ahy12g1672 362 SUPERFAMILY TPR-like 171 347 IPR011990 GO:0005515
Ahy12g1672 362 SUPERFAMILY TPR-like 43 223 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1672 Ahy-Chr12 90756778 90758086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1672 2 362 Calmodulin-binding Proteins AT4G28600 54.098 1.09e-117 356