Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1671 ATGGGTCAGGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATGATCAGTATGAGCAGGAGGAAGAAAAACATGAGGAAGTTGACGTGGATTATATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGACATTGGGATGATAGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAAGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTAAAGGATTTAGACCGCCAAATAATTACGGCATCGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAAATTCGTGTAGATGCACCTAGCGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTGGGCAGATATATCGGGCATTAGCAAATCAGGCAGGTGGCTACGAGTATCTCTCTTTCACGCAAAGGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTACCTAGTGATGCATATGCAGCTTTGAAGTATCTAGAAGATCAAGCAACAAATGACCCTTCTCTCTATTTTAATCATCACATGGATGCCGATGGTACTTTGCGCAATTTATTCTGGTGCGATGGTCTCAGCAGGGCCGACTACTCATTATTTGGCTATGTGCTGGCGTTTGATGCTACCTATAAGAGGAATAAATATATGTGTCCACTGGTGGTATTTTCTGGTGTCAATCATCACAATCAAACAATTATCTTTGCTGCTGCTTTAATTTGCGATGAGGAAAAAGACACATACAGGTGGTTGCTACAACAACTGAAGGTGGCAATGAATGGGAAAGCACCTGTTTCGGTGATCACGGATGGTGATCTATCAATGAAGTTCGCCATTGAGAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATGGCATCTGATTCGCAACGCAACAAGTAACATTGGCAAGCCCCACTTTACATCCATGTTTAGAAAGTGTATGCTAGGCGACTATGAAATTGATGTATTTCGTCAAAAGTGGTTTGAAATGGTTGAGGGATTTGGTGTCGAAAACAAGAATTGGGTCCTAGATATGTATAAAAAGAGACATTCATGGGCAACTGCACATATAAGAGGGAAGTTTTTTGCTGGTTTTCGGACTACTTCTCGGTGCGAGGGATTAAACTCGATCATTGCAAAGTATGTCAACTCAAGGTACAATCTGGTTGAGTTCATTCAACACTTTAATCGTTGTGTCGACCATATAAGGTGGAAAGAGGTCCAGGCTGACCTCGCCTCTGTGAATGGGAGACCCAGTATGCAAACCTGTTTTCAACAGTTAGAGAGGAGTGCTGCCAATGTTTACACCCTATCAATATTTCATATGTTCCAACCAATCCTTGTACGGGCTGCATCAATGAAGGTAATAAATATGAGGCAAACTGGCTCTTATGTGATTTACTCTGTCGGTTTGGACCAAATGCCAAATGAGATGTGGCGTGTATTCTGTTGTGACATTGAGATGGAATTCAATTGTTCATGTATGAGAATGGAATCATTTGGCATACCTTGTGAACACATAGTTTGCGTCTTGGTGCATGAAGATATAGAGGAGTTGCCAAGGTCATTAGTCTTGCCTCGGTGGACCAAGACTGCCAAAGTGGGTTTGCAAAATGCGGTCGGGCTTCATTGGGATTCTTTGATGCTAAGTCAGTACGGTTGTTTGATGGATTGGTTTAGACAACTAGCCAACTTTGCTTGCCGAGATAACGAGAGATTTATCTTTACACGGAAAATGGCTATGAATTTGTTGAAACAATTTAAGGAGGAAGATGCTGCACAAAAAGGGGGGGGGTCAATGATGCAGATAGTGTAA 2106 0.4212 MGQEFSHEGVNSEHTSYDQYEQEEEKHEEVDVDYMDEDDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVDIAFEFYNRYAKTRGFSARKNRTRKSRAGALKLKNFVCHRKGFRPPNNYGIGNLKRKPTPETRCGCSAMMEIRVDAPSGRWFISYFSDEHNHPLLDPRLTGLLPGHRFMSEADIGHMVNMKKGGISVGQIYRALANQAGGYEYLSFTQRDMYNKIAKQRRQLPSDAYAALKYLEDQATNDPSLYFNHHMDADGTLRNLFWCDGLSRADYSLFGYVLAFDATYKRNKYMCPLVVFSGVNHHNQTIIFAAALICDEEKDTYRWLLQQLKVAMNGKAPVSVITDGDLSMKFAIEKEFPNAHHRLCAWHLIRNATSNIGKPHFTSMFRKCMLGDYEIDVFRQKWFEMVEGFGVENKNWVLDMYKKRHSWATAHIRGKFFAGFRTTSRCEGLNSIIAKYVNSRYNLVEFIQHFNRCVDHIRWKEVQADLASVNGRPSMQTCFQQLERSAANVYTLSIFHMFQPILVRAASMKVINMRQTGSYVIYSVGLDQMPNEMWRVFCCDIEMEFNCSCMRMESFGIPCEHIVCVLVHEDIEELPRSLVLPRWTKTAKVGLQNAVGLHWDSLMLSQYGCLMDWFRQLANFACRDNERFIFTRKMAMNLLKQFKEEDAAQKGGGSMMQIV* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1671 701 Pfam MULE transposase domain 299 393 IPR018289 -
Ahy12g1671 701 PANTHER OS02G0262500 PROTEIN 77 638 - -
Ahy12g1671 701 ProSiteProfiles Zinc finger SWIM-type profile. 564 612 IPR007527 GO:0008270
Ahy12g1671 701 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Ahy12g1671 701 SMART 26again6 587 614 IPR006564 GO:0008270
Ahy12g1671 701 MobiDBLite consensus disorder prediction 1 32 - -
Ahy12g1671 701 MobiDBLite consensus disorder prediction 1 16 - -
Ahy12g1671 701 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 638 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1671 Ahy-Chr12 90744408 90748208 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g1671 MULE 6.40E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1671 - - ahf:112723376 1408.28