Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1665 ATGGCCTCCTCACCCACACCCACACCCACACCCTCATCTCCAAAACTAATTGCTCCAATTACCACCATAATCGCTACCACAACCACAACGACAACAACAAACACCACAAACGACGCCGTTTCGCCCACCAAGAAACCCCAACCGATTCCATGGACTCACCAGGAGACCGTTAACCTGATCAGGGCGTACCAGGAGAAATGGTACGCCTTGAAGCGCGGCCCACTCCGGGCCAACCAGTGGGAAGAGGTCGCCGTCGTCGTCGCCGCCCGCTGCGGCTACGACTTTAACCATCCTTGCAAGTCCGCCGTCCAGTGTCGCCACAAGATGGAGAAGCTCCGCCAGCGCCACCGAGCCGAGAAGAAGCAACATCTTCTCACCACTTCCCGCGTCCCTGCCCGTGCCACGTGGCAGTACTATGGCCTTATGGATGAGCTGGAGCGTGGCCCAATGCCGATCTCCGCCCGGCCCATAACCTCCATGGCGCCTACGGGCGGCAACGACGAGTACGGTAATTACGGAAGTTTCGATCAAAATGACGATGATTTCATTGAGGAAAATGAAGAAAGGGAAAACTATATAAAATCAAAGAGTATTAATTATCTTCTTAGCAAGAAACCCTCAATGAACAAGTGTAGAGGGATTTTGAGGGATCGTGTTCCAAAAGGATTGTGGAGATTTGATGATGCTGACTATGATGATGATGTTAATTATCTTGATGATGATGATGATGATGATGATGATGATGACGATGGTAATTGTGGTGGTGGTGGTGACGAGAGAGGAGTGGTAATGGTGGATGAGAGGGCTTTGGTTTCGGGTTTGAGTACAGAGATAAAAGACTTCACTGAGAGGTTCATTGGGATGGAGAATTTGAAGATGAGGATCGTGAAGGAAACTGAGAGGCGGAGGTTGGAGATGGAGAACAGGCGGATGGAGATGATCCTTGAGTCGCGGCAGCGGACCATTGATTCGATTGGGAGGGTCTTTGGGTCATCCAAGAGACTCAAGATGAGTGAAGGAAGCTGA 1026 0.5088 MASSPTPTPTPSSPKLIAPITTIIATTTTTTTTNTTNDAVSPTKKPQPIPWTHQETVNLIRAYQEKWYALKRGPLRANQWEEVAVVVAARCGYDFNHPCKSAVQCRHKMEKLRQRHRAEKKQHLLTTSRVPARATWQYYGLMDELERGPMPISARPITSMAPTGGNDEYGNYGSFDQNDDDFIEENEERENYIKSKSINYLLSKKPSMNKCRGILRDRVPKGLWRFDDADYDDDVNYLDDDDDDDDDDDDGNCGGGGDERGVVMVDERALVSGLSTEIKDFTERFIGMENLKMRIVKETERRRLEMENRRMEMILESRQRTIDSIGRVFGSSKRLKMSEGS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1665 341 Gene3D - 51 118 - -
Ahy12g1665 341 MobiDBLite consensus disorder prediction 236 259 - -
Ahy12g1665 341 MobiDBLite consensus disorder prediction 28 50 - -
Ahy12g1665 341 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 20 338 - -
Ahy12g1665 341 Coils Coil 102 122 - -
Ahy12g1665 341 Pfam Myb/SANT-like DNA-binding domain 50 145 IPR044822 -
Ahy12g1665 341 MobiDBLite consensus disorder prediction 236 253 - -
Ahy12g1665 341 Coils Coil 296 316 - -
Ahy12g1665 341 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 20 338 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1665 Ahy-Chr12 90440761 90442440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1665 51 165 Trihelix Transcription Factor Family AT3G14180 26.087 5.43e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy12g1665 Myb_DNA-bind_4 6.20E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1665 - - adu:107474774 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1665 12 90440761 90442440 Ahy12g1665 12 90440761 90442440 ECH
Ahy12g1665 12 90440761 90442440 Ahy2g1429 2 75598691 75600403 hybridization