Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1662 ATGGCAGTTGATGCTATCACAAACATCAAGCTAGCCTATAGGGTGACTAGAAATTGGCTTGGAGATCCATGTGGCCCTGAAGCATACAAGTGGGATGGTCTAGATTGTAATTTTGATGGCGATGGGATCCCAAGAATCACTTCGATGAACTTGTCTACAAGTGGATTGACAGGACACATAGTTCCTGATCTCTTAAAGCTTACTATGCTAAAGTCATTGGATTTATCGAACAATAACCTAACTGGGGATGTTCCTTATTTTCTGGCACAACTGCAATCACTACAAAACTTAAACTTGGAGAACAACAACCTATCAGGTTCAATTCCAAATGAACTCTTTCAAAAACAAAGAGATGGTATATTATCATTAAGGGTGGGACAAAATCCAAATTTATGTGCCTCAACTTCATGCAACCAACAAACAAATGATACAAAGAAGAAAAAGCATAATGCAGTTATTATAGTGCTAGCATCAATTGCAGGGATATTGCTTCTTCTTGTGATTGCAGCAGTTATAACCTTTTACCAAAGCAAATATTATGATGTTGATAAAAGCATTATTCTTGGAAAGCCTCGTAATTCAATTAAGGGGTCAGAATTGGAATTGAAGCAACGACAATATTCATTTAATGAAGTTGTTAAGATCACCAACAGCTTTGATAGGATTCTTGGCAGAGGTGGATTTGGAACTGTTAAGCTTCTAATGAGAGTACATCACCGAAGTCTGACTTCTCTTATTGGTTATTGCAACGAAGAAACTAATATAGGACTCATCTATGAATATATGGCAAATAATGGAAACTTAAATGAATATCTTTCAGGAAACAATAAGGAAAAGTCATTGAATTGGGAAGATAGACTTCGAATAACATTGGACGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATCCACAGAGATGTAAAATGTACAAATATTCTATTAGATGAAAACTTTCATGCCAAACTAGCTGATTTTGGATTATCCAAATGTTTTGCTGTTGATGGTGATACACATGTGTCAACAATTGTCGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACGACATCAAACAGACTAACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAACCGGTGATAATAGGAAGGGAAGATATGACTCATCATATAAGTCAATGGGTCAACTCCATGGTTGCTAAAGGGGATATAACAAAAATTGTTGACTCAAGGTTACAAGGAGATTTTGATAGCAACTCTGCATGGAGAGCGGTTGAAATAGCAATGGCCTCTGTGTCTGCCATTTCGATGGAAAGGCCATACATGACTGATATAGTAAAAGAGCTAAAGGAGTGTTTGGCTGCAGAGTTAGCTCGAAAACATAATAGTTGTGACATTCAAAACGAAGATTTAGTTGGGCACTTGGGCAGGTAA 1458 0.3745 MAVDAITNIKLAYRVTRNWLGDPCGPEAYKWDGLDCNFDGDGIPRITSMNLSTSGLTGHIVPDLLKLTMLKSLDLSNNNLTGDVPYFLAQLQSLQNLNLENNNLSGSIPNELFQKQRDGILSLRVGQNPNLCASTSCNQQTNDTKKKKHNAVIIVLASIAGILLLLVIAAVITFYQSKYYDVDKSIILGKPRNSIKGSELELKQRQYSFNEVVKITNSFDRILGRGGFGTVKLLMRVHHRSLTSLIGYCNEETNIGLIYEYMANNGNLNEYLSGNNKEKSLNWEDRLRITLDAAQGLEYLHNGCKPPIIHRDVKCTNILLDENFHAKLADFGLSKCFAVDGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQPVIIGREDMTHHISQWVNSMVAKGDITKIVDSRLQGDFDSNSAWRAVEIAMASVSAISMERPYMTDIVKELKECLAAELARKHNSCDIQNEDLVGHLGR* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1662 485 ProSiteProfiles Leucine-rich repeat profile. 93 115 IPR001611 GO:0005515
Ahy12g1662 485 Pfam Protein tyrosine and serine/threonine kinase 229 456 IPR001245 GO:0004672|GO:0006468
Ahy12g1662 485 Pfam Leucine Rich repeats (2 copies) 68 108 IPR025875 -
Ahy12g1662 485 PANTHER PUTATIVE-RELATED 231 473 - -
Ahy12g1662 485 ProSiteProfiles Protein kinase domain profile. 180 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1662 485 SUPERFAMILY L domain-like 22 115 - -
Ahy12g1662 485 PRINTS Leucine-rich repeat signature 91 104 - -
Ahy12g1662 485 PRINTS Leucine-rich repeat signature 70 83 - -
Ahy12g1662 485 PANTHER OS07G0107800 PROTEIN-RELATED 231 473 - -
Ahy12g1662 485 Gene3D Ribonuclease Inhibitor 5 121 IPR032675 -
Ahy12g1662 485 Gene3D Phosphorylase Kinase; domain 1 228 263 - -
Ahy12g1662 485 PANTHER OS07G0107800 PROTEIN-RELATED 3 231 - -
Ahy12g1662 485 SUPERFAMILY Protein kinase-like (PK-like) 198 457 IPR011009 -
Ahy12g1662 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Ahy12g1662 485 Gene3D Transferase(Phosphotransferase) domain 1 264 480 - -
Ahy12g1662 485 PANTHER PUTATIVE-RELATED 3 231 - -
Ahy12g1662 485 SMART serkin_6 217 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1662 Ahy-Chr12 90195646 90205969 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1662 3 477 Receptor kinase-like Gene Family AT1G51850 47.013 1.09e-152 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Ahy12g1662 PK_Tyr_Ser-Thr 7.60E-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1662 - - ahf:112730230 927.161