Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1643 ATGGCTTCAACAAAGTTGCCTTCAGGTGCAAGCAAGAAGTTCAAGCCTACAGATGAAGAACTCATTCAAGATTTTCTCCTTAACAAAATCAATGGGAGGCCTCTACCAAACAATGGAACCATTCTTGAAGGTGAAATGTTTGGTACGGAGAAGAATCCATGGGAAATTTGGGAAGAAAACGTTGAAAATTCTTATGACGGGAAGGACCTCTATTTCTTCACTACTCTAAAAAGGAAGTTCTCAACTAACAGCTTGCGGATGGTTCGCACCATTGGGTTGGGTTCTTGGGAAGGTGAAGACATCGGAAAAGAGATTATGGCCAATAAAACTAACCAGCGCATTGGAATGAGGAAACGATATCGCTTTGAGAAGAGTGGTACTAGCCATGATGGTGGATGGATCTTGCATCAATATAGCATTGATTCTTCTTTGTTACCAAATCCATCCAATATGAATAATTATGTTTTATGCAGATTTAGAAAGAATAACAGTAAACCTCGTCAAAAGAAAAGGAAAATTGTGGCTCCTGAAACTGTGGCTACTGTAATACCGAATGCCAATGATTATGCTGGGAAAGTAGAATTTGTTAACCAATTAGAGAATGGAGATGAAAGGATGGAGATTCAAAATGAATCACCAAACCAATCAGACAAAGCAAACCAATCAGAGAATAATGGAGATGAGAAGATTGATGAGATTCAGAGAGAACTAACAAATCAATTAGAGAATAATGAGGATGAAATACAGGTTGAGGCTTTTGATACTACTATTGGAATTGAGGCAAACTGTGAGGAAAAGGGAGATGGTGATGATGATGATGATGAAGATGACAATGATATGACATGGCCAGAGTATTTTGCAATGCAATTGTTAGAACTTAACAAAGACTGGTTCATCCCAAAGGATGATGTCCCCATTATTCCAAATAAATTTCACAATGACATGTTAAAGCGGTTTAAAAAAGTTTTATGA 972 0.3755 MASTKLPSGASKKFKPTDEELIQDFLLNKINGRPLPNNGTILEGEMFGTEKNPWEIWEENVENSYDGKDLYFFTTLKRKFSTNSLRMVRTIGLGSWEGEDIGKEIMANKTNQRIGMRKRYRFEKSGTSHDGGWILHQYSIDSSLLPNPSNMNNYVLCRFRKNNSKPRQKKRKIVAPETVATVIPNANDYAGKVEFVNQLENGDERMEIQNESPNQSDKANQSENNGDEKIDEIQRELTNQLENNEDEIQVEAFDTTIGIEANCEEKGDGDDDDDEDDNDMTWPEYFAMQLLELNKDWFIPKDDVPIIPNKFHNDMLKRFKKVL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1643 323 Coils Coil 230 250 - -
Ahy12g1643 323 MobiDBLite consensus disorder prediction 265 280 - -
Ahy12g1643 323 Gene3D NAC domain 17 167 IPR036093 GO:0003677|GO:0006355
Ahy12g1643 323 MobiDBLite consensus disorder prediction 208 228 - -
Ahy12g1643 323 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 250 - -
Ahy12g1643 323 ProSiteProfiles NAC domain profile. 8 162 IPR003441 GO:0003677|GO:0006355
Ahy12g1643 323 Pfam No apical meristem (NAM) protein 13 140 IPR003441 GO:0003677|GO:0006355
Ahy12g1643 323 SUPERFAMILY NAC domain 12 161 IPR036093 GO:0003677|GO:0006355
Ahy12g1643 323 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 250 - -
Ahy12g1643 323 MobiDBLite consensus disorder prediction 261 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1643 Ahy-Chr12 88960809 88964180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1643 5 159 NAC Transcription Factor Family AT5G13180 33.121 1.09e-16 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy12g1643 NAM 7.00E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1643 - - ahf:112730219 646.736