Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1635 ATGGTGTTCTTACTGTCACTGTTGCCGAGGCAGAAGTCGGGTTTCATCTTCGAAGCTTTGCTAGGGTTTGCTGATTCAAATCATCCATCTATCATCTTCCCTTTGTTTCTGCCCTTATTAGCAGACGCTGTTGGAATTATTGCATCCATGTCTAACATCAGCAACAATGTGGCTGGGGTTGACAACACCTTCAGAAGAAAATTTGATCGAGAAGAGTATTTGGAACGAGCTCAGGAGCGTGAGAGGCAGGAGGAGGAGGGTCGATCTAAATCTAAAGCTAAAGGTCCTCCAGTGCAGAGGAAACCCCTAAAACATAGAGATTATGAAGTGGACCTTGAGTCCCGCCTAGGCAAGACTCAAGTTGTTACGCCGGTTGCACCACTGAGTCAGCAGGCTGGATATTACTGCTCTGTTTGTGAGTGTGTGGTAAAGGACTCAGCGAACTACTTGGATCATATTAATGGAAAGAAACATCAAAGAGCTTTGGGCATGTCTATGCGAGTTGAACGAGCCTCTCTCCAACAGGTTCAGGAACGATTTGAGGTTCTTAAGAAACGTAAAGATCTTGGCACATTCACCGAGCAAGATCTTGACGAAAGGGTTCTAAAACAGCAGCAAGAAGAGGAAGAAAGAAAACGATTACGTCGTGAAAAGAAGAAGGAAAAGAAAGAGAAGGCAATGGAAGAACCGGAAATTGATCCTGATGTTGCGGCCATGATGGGGTTTGGTGGTTTCCGGTCATCAAAGAAATGA 753 0.4502 MVFLLSLLPRQKSGFIFEALLGFADSNHPSIIFPLFLPLLADAVGIIASMSNISNNVAGVDNTFRRKFDREEYLERAQERERQEEEGRSKSKAKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQERFEVLKKRKDLGTFTEQDLDERVLKQQQEEEERKRLRREKKKEKKEKAMEEPEIDPDVAAMMGFGGFRSSKK* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1635 250 MobiDBLite consensus disorder prediction 201 232 - -
Ahy12g1635 250 Pfam Zinc-finger of C2H2 type 134 158 - -
Ahy12g1635 250 MobiDBLite consensus disorder prediction 75 93 - -
Ahy12g1635 250 Gene3D Classic Zinc Finger 129 166 - -
Ahy12g1635 250 Coils Coil 197 229 - -
Ahy12g1635 250 MobiDBLite consensus disorder prediction 75 105 - -
Ahy12g1635 250 MobiDBLite consensus disorder prediction 201 250 - -
Ahy12g1635 250 SMART ZnF_U1_5 131 165 IPR003604 GO:0003676|GO:0008270
Ahy12g1635 250 SUPERFAMILY beta-beta-alpha zinc fingers 130 171 IPR036236 -
Ahy12g1635 250 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 56 250 IPR040107 GO:0000398|GO:0005681
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1635 Ahy-Chr12 88867794 88873847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1635 54 196 C2H2 Transcription Factor Family AT3G05760 82.517 2.45e-84 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1635 K12848 - gmx:100527057 310.842