Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1605 ATGGCGCCAAAGAATAAGAAGAGATCTAGGGTTTCCAACGACGAAGAAGAAATCGCATATGAACAGCCACACTCCCCTCAGAACAACAACGAAAACACCCTCTATCAGGTACTTGGTGTAGAGAGAACAGCATCACAACAGGAAATAAAGAAGGCTTATTACAAGTTAGCATTGAGGCTGCATCCTGACAAAAACCCTGGTGATGAGGAGGCTAAAGCAAAATTTCAGCAACTGCAAAATGTTATCTCGATTCTTGGGGATGAAGAAAAGCGAGCCATTTATGATCAGACTGGTTGTGTTGATGATGCTGACCTTGCCGGGGATGTTGTCCAGAATCTTCGCAACTACTTTAGAACAATGTACAAGAAGGTCACTGAATCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCAGAGAAAAATGATTTGATTGATTTGTACAAGAAGTGCAAGGGTCATATGAACAGGCTATTCTGTTCAATGCTTTGTTCTGATCCCAAATTTGATTCTCACCGATTCAAGGATATTCTTGATGAGGCCATAGCAGCTGGAGAACTTAAAGAAACAAAAGCTTATAAGAAATGGGCAAAAAGAATATCAGAAATCAAGCCACCAACTAGTCCTTTAAAGAGGAGGGTCAAACCAAGTAAGAAACCAGAAACAGATCTTTATGCCATCATCTCACAACGTCGAAATGAGAGAAGAGACAAGTTTGAATCTATGTTTTCATCTCTAGTTTCAAAATATGGTGGAAGTAATGTGCCGGAACCCTCTGAAGAGGAATTTGAAGCTGCACAAAGGAAGATGGAAAGCCGACGTTCCGCAAAGAAATCAAAGCGGAAATAA 855 0.4058 MAPKNKKRSRVSNDEEEIAYEQPHSPQNNNENTLYQVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVISILGDEEKRAIYDQTGCVDDADLAGDVVQNLRNYFRTMYKKVTESDIEEFEANYRGSDSEKNDLIDLYKKCKGHMNRLFCSMLCSDPKFDSHRFKDILDEAIAAGELKETKAYKKWAKRISEIKPPTSPLKRRVKPSKKPETDLYAIISQRRNERRDKFESMFSSLVSKYGGSNVPEPSEEEFEAAQRKMESRRSAKKSKRK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1605 284 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 5 284 IPR042977 -
Ahy12g1605 284 Pfam DnaJ domain 34 95 IPR001623 -
Ahy12g1605 284 MobiDBLite consensus disorder prediction 1 31 - -
Ahy12g1605 284 MobiDBLite consensus disorder prediction 7 21 - -
Ahy12g1605 284 PRINTS DnaJ domain signature 70 90 IPR001623 -
Ahy12g1605 284 PRINTS DnaJ domain signature 35 53 IPR001623 -
Ahy12g1605 284 PRINTS DnaJ domain signature 53 68 IPR001623 -
Ahy12g1605 284 PRINTS DnaJ domain signature 90 109 IPR001623 -
Ahy12g1605 284 MobiDBLite consensus disorder prediction 252 284 - -
Ahy12g1605 284 CDD DnaJ 33 87 IPR001623 -
Ahy12g1605 284 SUPERFAMILY Chaperone J-domain 32 106 IPR036869 -
Ahy12g1605 284 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 5 284 - -
Ahy12g1605 284 Gene3D DnaJ domain 18 113 IPR036869 -
Ahy12g1605 284 ProSiteProfiles dnaJ domain profile. 33 98 IPR001623 -
Ahy12g1605 284 SMART dnaj_3 32 90 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1605 Ahy-Chr12 86813736 86816817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1605 35 95 C2H2 Transcription Factor Family AT1G74250 40.909 1.03e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1605 K09529 - gmx:100781463 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1605 12 86813736 86816817 Ahy12g1605 12 86813736 86816817 ECH
Ahy12g1605 12 86813736 86816817 Ahy2g1362 2 72228242 72231300 hybridization
Ahy16g0382 16 7409658 7412381 Ahy12g1605 12 86813736 86816817 PCT
Ahy6g0943 6 12350953 12353726 Ahy12g1605 12 86813736 86816817 PCT
Ahy12g1605 12 86813736 86816817 Ahy16g0382 16 7409658 7412381 PCT
Ahy12g1605 12 86813736 86816817 Ahy6g0943 6 12350953 12353726 PCT