Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1600 ATGGCATCAAAGGGTTTATTGCAAACTGAAGAGTTGTACAAGTATATTTTGGAATCTAGTGTCTTCCCACGTGAGCCAGAGCCTCTCAAGGAGTTAAGGGATGTAACTGCTAATCATCCAAGGAAATTAATGGCTACAGCACTGGATGCAGGTCAGATCATTACCATGCTTCTACAACTAGTAAATGCTAAGAAGACTATTGAGATCGGAGTCTTCACCGGATACTCCCTTCTACTGACAGCGCTTTCGATTCCTGAGGACGGGAAGATAACCGCTATCGATATAGATCGAGATGCATATGAAATCGGATTACCGATAATTAAGAAAGCCGGCGTCGAGCACAAGATTAACTTTGTGGAGTCCGAGGCTTTGCCGGTTCTAGATCAGCTCTTGACTGATCATGAGAATGAAGGGAGTTATGACTATGCATTTGTTGATGCTGACAAAGTTAACTATTGGAATTACCATGAGAGGCTATTGAAGTTGTTGAAGGTTGGTGGGATAGTAGTCTATGATAACACTCTCTGGGGAGGCTCTGTTGCAAAGAATGAAAATGAGACTCCGGAATTCTACAGACCTGGCAGGCATCTGACAATCGAATTCAACAAACAAATTGCAGCCGATTCTCGAGTCCAGATTTCGCTTGCTCCATTTGGGGACGGCATCACCATATGCAAGCGTATCATGTGA 690 0.4362 MASKGLLQTEELYKYILESSVFPREPEPLKELRDVTANHPRKLMATALDAGQIITMLLQLVNAKKTIEIGVFTGYSLLLTALSIPEDGKITAIDIDRDAYEIGLPIIKKAGVEHKINFVESEALPVLDQLLTDHENEGSYDYAFVDADKVNYWNYHERLLKLLKVGGIVVYDNTLWGGSVAKNENETPEFYRPGRHLTIEFNKQIAADSRVQISLAPFGDGITICKRIM* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1600 229 Gene3D Vaccinia Virus protein VP39 1 229 IPR029063 -
Ahy12g1600 229 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 5 228 IPR002935 GO:0008171
Ahy12g1600 229 CDD AdoMet_MTases 67 171 - -
Ahy12g1600 229 PANTHER O-METHYLTRANSFERASE-RELATED 3 228 - -
Ahy12g1600 229 Pfam O-methyltransferase 25 228 IPR002935 GO:0008171
Ahy12g1600 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 227 IPR029063 -
Ahy12g1600 229 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 3 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1600 Ahy-Chr12 86712392 86716334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1600 3 228 Monolignol Biosynthesis Gene Families AT4G26220 69.912 1.63e-121 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1600 K00588 - rcu:8265096 356.295