Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1598 ATGGTTGATTTGATTGGAGAGTCATTGTATAACCAAATAGGGAATGTTTCAGTTGAGGAAATGGACGAATTGTTAGTTGATAGCGATGGCAATGATGTTGAAGACCTGTTATTGAATAGTACAAGAAGTATCGGTCAGGTTAATTTCGTAGGTTTGAGCGTTGATGCTGCTAAGAAGTATGTATTTTCAGACCTTAATGTTGCCTATGCCTTTTACAATGCATTTGGGAGGGTCAATGGATTTTCAATTAGGAAGTTCAAGGTTGGGCGAAGTGAGATTGATAAGCACATACTCTGGCAAACATTTGTGTGTTCGAGACAAGAATATCATATTTTCAGAGGGGTTGATGAAACAAATAGGAAGAGAGCTCCAAAGCCAGAGACTAGGTGTGGGTGTGTAGCACAAATGCGAGTTCACATAGATGTTGGCAGGGACTGGTAG 441 0.4014 MVDLIGESLYNQIGNVSVEEMDELLVDSDGNDVEDLLLNSTRSIGQVNFVGLSVDAAKKYVFSDLNVAYAFYNAFGRVNGFSIRKFKVGRSEIDKHILWQTFVCSRQEYHIFRGVDETNRKRAPKPETRCGCVAQMRVHIDVGRDW* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1598 146 Pfam FAR1 DNA-binding domain 71 142 IPR004330 -
Ahy12g1598 146 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 43 142 - -
Ahy12g1598 146 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 43 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1598 Ahy-Chr12 86704777 86705324 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g1598 FAR1 2.20E-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1598 - - aip:107627403 299.286