Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy12g1595 | ATGGCAGACCCTTACTCTAATTTCTTCAGAGGCTTCTTCCACCATAACAATAACCATAACCATTTCAATTATAATCCCACTCATCCTCCTCCTCTTTCTTCCTCTCATCACCACCACCACCACCACCACCATCCTTATCTTCACAACTTCATCAAAACCACCAATTACAACAACAATAATAATAGCACCTTTCTCCACCATCAAATTACAACTGCCACTACTTCTTCTTCTTCTTCTTCTTATTCTTATTATTCTTCACCCCCTTCCCCTCCTCTCAGAGAAGCTCTCCCACTTCTCAGTCTTAGTCCAGCAAACCAGGAACGCGAGGAACATCACTATCATCATCACCATGATGATTATACTCATCAACCAGAAAAAGATCAAGAAACACAAGATCATAGTCTTTCCACCACCACCTGCACTGCCATGGATACTAGTTTTGTCCTCATCCACGACAAAATGGACGAGGACATCAGAATCCATGGCGGTCGCAACAAGCCCAAAGGCGAGGCGAAAGGGGAGGACGGCAACAACGACGAAGACAAAGACGACCAAGAAGAAGACAACAACAATAGTGTGACGGTTGCACTTCACATAGGGTTACCAAACCCTAGTGCTGCTGAGCTGGCAACAATTACCTCCATAGAATCTTCTTCTAACAATAATAACAATAGCAATTCATCATCAACGGAGAAAGAACAACATCATCATGAAGAAGAAGGAGAAGGGAGTGAAGAGTCGCAGTGTCATAAAGGGTTCTTGGGTACAAGACTCAACAAGGGACAGTACTGGATCCCAACCCCAACCCAGATTCTCATTGGTCCAACTCAATTTTCTTGCCCTGTTTGCTACAAAACTTTCAACAGATACAACAATATGCAAATGCATATGTGGGGGCATGGATCACAATACAGAAAAGGTCCTGAATCTCTAAGAGGAACTCAACCAACAGGTATGCTTAGGCTTCCATGTTATTGCTGTGCACCAGGTTGTAGGAACAACATTGACCACCCAAGATCAAAGCCATTGAAGGATTTTAGAACCCTCCAAACTCATTACAAGAGGAAGCATGGGATCAAGCCCTTCATGTGCCGGAAATGCGGCAAGGCCTTCGCCGTCCGAGGCGATTGGCGGACGCATGAGAAAAATTGTGGCAAACTTTGGTATTGCATCTGTGGATCCGATTTTAAACACAAGAGGTCGCTTAAGGATCATATAAAGGCTTTTGGGAGCGGACACGCCGCGTTTGGGATCCACGGCGGATTATTTGAAGAGGAGGAGGAGCCGGCATCTGAAGTCGAACAAGATAATGACGAACTCAACCAGTAA | 1329 | 0.4477 | MADPYSNFFRGFFHHNNNHNHFNYNPTHPPPLSSSHHHHHHHHHPYLHNFIKTTNYNNNNNSTFLHHQITTATTSSSSSSYSYYSSPPSPPLREALPLLSLSPANQEREEHHYHHHHDDYTHQPEKDQETQDHSLSTTTCTAMDTSFVLIHDKMDEDIRIHGGRNKPKGEAKGEDGNNDEDKDDQEEDNNNSVTVALHIGLPNPSAAELATITSIESSSNNNNNSNSSSTEKEQHHHEEEGEGSEESQCHKGFLGTRLNKGQYWIPTPTQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRSKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAFGIHGGLFEEEEEPASEVEQDNDELNQ* | 443 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy12g1595 | 442 | Coils | Coil | 430 | 442 | - | - | |
Ahy12g1595 | 442 | SUPERFAMILY | beta-beta-alpha zinc fingers | 247 | 300 | IPR036236 | - | |
Ahy12g1595 | 442 | PANTHER | ZINC FINGER PROTEIN WIP2 | 59 | 439 | IPR043584 | GO:0003700|GO:0010468 | |
Ahy12g1595 | 442 | MobiDBLite | consensus disorder prediction | 158 | 178 | - | - | |
Ahy12g1595 | 442 | MobiDBLite | consensus disorder prediction | 106 | 136 | - | - | |
Ahy12g1595 | 442 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 362 | 382 | IPR013087 | - | |
Ahy12g1595 | 442 | SMART | c2h2final6 | 362 | 382 | IPR013087 | - | |
Ahy12g1595 | 442 | SMART | c2h2final6 | 278 | 300 | IPR013087 | - | |
Ahy12g1595 | 442 | PANTHER | ZINC FINGER PROTEIN WIP2-LIKE | 59 | 439 | - | - | |
Ahy12g1595 | 442 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 280 | 300 | IPR013087 | - | |
Ahy12g1595 | 442 | SUPERFAMILY | beta-beta-alpha zinc fingers | 343 | 382 | IPR036236 | - | |
Ahy12g1595 | 442 | MobiDBLite | consensus disorder prediction | 106 | 132 | - | - | |
Ahy12g1595 | 442 | MobiDBLite | consensus disorder prediction | 158 | 189 | - | - | |
Ahy12g1595 | 442 | Gene3D | Classic Zinc Finger | 277 | 300 | - | - | |
Ahy12g1595 | 442 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 278 | 305 | IPR013087 | - | |
Ahy12g1595 | 442 | MobiDBLite | consensus disorder prediction | 230 | 247 | - | - | |
Ahy12g1595 | 442 | MobiDBLite | consensus disorder prediction | 24 | 44 | - | - | |
Ahy12g1595 | 442 | Gene3D | Classic Zinc Finger | 339 | 415 | - | - | |
Ahy12g1595 | 442 | MobiDBLite | consensus disorder prediction | 216 | 249 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy12g1595 | Ahy-Chr12 | 86366564 | 86371102 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy12g1595 | 193 | 438 | C2H2 Transcription Factor Family | AT3G57670 | 75.097 | 2.82e-137 | 397 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Ahy12g1595 | None | None | None |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy12g1595 | 12 | 86366564 | 86371102 | Ahy12g1595 | 12 | 86366564 | 86371102 | ECH | |
Ahy12g1595 | 12 | 86366564 | 86371102 | Ahy18g0340 | 18 | 2921200 | 2923113 | ECH | |
Ahy12g1595 | 12 | 86366564 | 86371102 | Ahy13g0561 | 13 | 5832192 | 5834515 | ECH | |
Ahy12g1595 | 12 | 86366564 | 86371102 | Ahy2g1355 | 2 | 71408754 | 71413314 | hybridization | |
Ahy16g0384 | 16 | 7460608 | 7462602 | Ahy12g1595 | 12 | 86366564 | 86371102 | PCT | |
Ahy6g0940 | 6 | 12269683 | 12271634 | Ahy12g1595 | 12 | 86366564 | 86371102 | PCT | |
Ahy12g1595 | 12 | 86366564 | 86371102 | Ahy16g0384 | 16 | 7460608 | 7462602 | PCT | |
Ahy12g1595 | 12 | 86366564 | 86371102 | Ahy6g0940 | 6 | 12269683 | 12271634 | PCT |