Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1580 ATGAGTGCCCTTCATATCATGGCTTCGTCTTCATCTCAGATAAAATATGATGTCTTCATCAGTTTTAGAGGTTTAAACACCCGTCGCGGTTTTCTAAGCCATTTGCTTAAGGCATTAAGGGAGAAACAAATTGATACATATGTGGATGACAGGCTCAAAGAAGGAGATGAGTTATTGCCTGCCTTTTTTACAGCAATTGAGAAATCACAAATTGTATTGGTTATATTTTCCAGCGATTATGCTTCTTCAAAATGGTGTTTGGAAGAGCTTGTCAAAATAACAGAATGCATGACAAAAAATTGGCAAATTGTAATACCTATCTTCTACAATATAGATCCATCAGATGTACGACGTCAAAAGGGGTGCTACCAAAATGCATTTGTTCATCATGAAAAATCTTTCAAAGACAACATCATGACTGTAGAAAAATGGAAACATTCCTTGAAAAGAGTTGCCAATTTATCAGGATTTCATTCCATAAATTTTGGGACTGAAGTTGAACTTATTGAAAAAGTTGTACAACGTGTGTTAACAAGGTTGAATTACATGCCCCGAATTGAGTTCAAAGGTCTTATTGGAATCGATAAACCAATTGAAGAGCTTCAATCAATGATGTCATGCACTGCATCAAAAGATGTTCATATTATAGGAATTTGGGGTATGGGTGGTATTGGTAAAACCACTATAGCCAGTGCATTATTTAATATATTATGCTCTGAATTTGAAGGTTGCTGTTTTGTTCCAAATGTCAGAGAACAATCAGAGAAGAATGGGATAATCCAATTAAGAGATAAACTTCTTTCCATATTGTTAGAGGAAAAAGATCTAAACATTGGTGCTAATGGAGTACCAAGTCATGTTTTGAGGAGACTTGGTCGCAAGAAGATTCTTGTTGTTCTTGATGATGTTAATAATCCAGATCACGTTCAAAACTTAGTTGGAGGACATAAATGGTTGGGTCAAGGTAGCAGAATCTTCATCACAACTAGAGATAAGCATGTGATTTGTAAAGAAGCCGATGATATTTATGAAATTGGGGCATTGGAACACCATGAAGCTTTGCAACTTTTAAATTTGCATGCCTTCAATGGAAGGAGCCTACAAATGAATCATCATAATCTTATAACAAAAGTAGTTGATTATGCCAAGGGAATCCCCTTAGCCTTAAAGGTGTTAGGAACTTTTCTTTATGGAAAAAGTGCTAAAGAATGGGAAAGTCAATTGCAAAAACTTGAGAAAATGTCATTCAACGAAATCCAAAATGTTTTGAGATTAAGTTACGAAGGACTAGATCGAGAAGAAAGCAACATATTTTTATATATTGCTTGTTTTTTCAAAGGAGATGATAACATTAAAATTTTACTGGATGCATGTGGTTACTCAACAGCTATTGCTTTGAAAACTCTTCATGACAGAGCTCTTATAATTGTTTCAAAAGATGGAAAGCACGTAACCATGCACGATTTGATTCAAGAAATGGGTCGAGAAATTGTTCGTCGGCAAAACATTGAAAAGTTTGGGGAACGAAGTCATTTATGGGATCCTATAGACATAACTCAAGTACTAAAGCAGAACCAGGGGACTGATCGTATTGAAAGCATAACCTTCAACATGTCAAGTGCTCCTGATCTGAGGTTAAATCGTCATTCCCTTGCTAAAATGAAAAATCTTAACTTTCTGAGATTCTATTCATATGATACATATGGGGTGCACCTTCCAGAAGGCCTTGAAAAATTGCCAGACAAACTAAAACTTTTTCACTGGGATGATTACCCTTTGGAATCCTTGCCCACCAAATTTAATGCAGAGAATCTTGTTGAACTTGATATGCAAGGAAGTTACGTCAAAAAACTTTGGAATGACGTACAGAATTTGGCTAATCTAAGACGCATTGATCTTGATGGATCCAAGCAATTGATAGAGCTTCCAGACCTCTCCAAAGCCTCAAATCTTGAAACATTATCACTCTGTGACTGTGAAAATTTGCGCTCTGTTCATCCATTTATTTTCTTCCTCCAAAAACTAATTCATGTGGACCTAGAGCGTTGTATAAGGTTGAAGAAACTCCCAGGTAAGTGTAGCAGCAGCAGTAAGGTTGAACACTTGAACCTATCAGGATGCAAGAGTCTAAAGCATCTGCCAGATAGCACATCCAAATTAGAATTTCTTAAAGAGCTTTACCTTGAAGGATGCCAGCAACTTGACACATCAAACCTACACATTTTATTTAGTGGGTTATCATCATTAGAAAGGCTCAATTTGGGTGGGTGCCATAACTTGGATAAACTACCAGACAATGTCAACAACTTATCATTGTTATGTTGGTTATCAATAAAGGGAACTAATGTGAAGAGCTTGCCAGAAAGCATCAAACATCTTCGAAAGTTGAGATCTCTCTACTTGGGGAGTTGTAGGAGGCTTCAATCATTGCCTGAGCTTCCACCTTCTATACAATACTTGGAAGTTGTTGATGATGGGGTGAGGGTTGATGTTGTTTTGAGTGATTCATCATCCTCATCCTCGAATGATGGATATGAGAGTGTAGAAAATGAGGCTTACAAGTCTCTTCTTCCTAGATTTGCAGATTTTGACAATAGTGAGAATAATAAAGCAGAGAGAAAGAAACTTAAAAAGAGAAAGGTTTTACCTAAGAAAAAGACTGTTCAGGGCCCAAAAAGAGTTGACAGAACTGGACCAATTGGTAAGAATAGCGTTAGACGTAGTAGTACAAATAATAAGGTTAAGACACCTAAGGCTATGACTACAAAGAGAAGGAATTCTAAGAAGTACTTTGGAGTAAGAAGAAAACATGTTCTTGGAATGGGCTGGATAAGGACAAAAATAATGGAGATGTAG 2856 0.3659 MSALHIMASSSSQIKYDVFISFRGLNTRRGFLSHLLKALREKQIDTYVDDRLKEGDELLPAFFTAIEKSQIVLVIFSSDYASSKWCLEELVKITECMTKNWQIVIPIFYNIDPSDVRRQKGCYQNAFVHHEKSFKDNIMTVEKWKHSLKRVANLSGFHSINFGTEVELIEKVVQRVLTRLNYMPRIEFKGLIGIDKPIEELQSMMSCTASKDVHIIGIWGMGGIGKTTIASALFNILCSEFEGCCFVPNVREQSEKNGIIQLRDKLLSILLEEKDLNIGANGVPSHVLRRLGRKKILVVLDDVNNPDHVQNLVGGHKWLGQGSRIFITTRDKHVICKEADDIYEIGALEHHEALQLLNLHAFNGRSLQMNHHNLITKVVDYAKGIPLALKVLGTFLYGKSAKEWESQLQKLEKMSFNEIQNVLRLSYEGLDREESNIFLYIACFFKGDDNIKILLDACGYSTAIALKTLHDRALIIVSKDGKHVTMHDLIQEMGREIVRRQNIEKFGERSHLWDPIDITQVLKQNQGTDRIESITFNMSSAPDLRLNRHSLAKMKNLNFLRFYSYDTYGVHLPEGLEKLPDKLKLFHWDDYPLESLPTKFNAENLVELDMQGSYVKKLWNDVQNLANLRRIDLDGSKQLIELPDLSKASNLETLSLCDCENLRSVHPFIFFLQKLIHVDLERCIRLKKLPGKCSSSSKVEHLNLSGCKSLKHLPDSTSKLEFLKELYLEGCQQLDTSNLHILFSGLSSLERLNLGGCHNLDKLPDNVNNLSLLCWLSIKGTNVKSLPESIKHLRKLRSLYLGSCRRLQSLPELPPSIQYLEVVDDGVRVDVVLSDSSSSSSNDGYESVENEAYKSLLPRFADFDNSENNKAERKKLKKRKVLPKKKTVQGPKRVDRTGPIGKNSVRRSSTNNKVKTPKAMTTKRRNSKKYFGVRRKHVLGMGWIRTKIMEM* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1580 951 Pfam TIR domain 15 186 IPR000157 GO:0007165
Ahy12g1580 951 ProSiteProfiles TIR domain profile. 14 180 IPR000157 GO:0007165
Ahy12g1580 951 Gene3D - 180 342 IPR027417 -
Ahy12g1580 951 MobiDBLite consensus disorder prediction 882 919 - -
Ahy12g1580 951 MobiDBLite consensus disorder prediction 902 917 - -
Ahy12g1580 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Ahy12g1580 951 Gene3D - 8 179 IPR035897 -
Ahy12g1580 951 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 696 IPR044974 GO:0006952
Ahy12g1580 951 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 694 842 IPR044974 GO:0006952
Ahy12g1580 951 Gene3D - 347 431 IPR042197 -
Ahy12g1580 951 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 694 842 - -
Ahy12g1580 951 SUPERFAMILY L domain-like 486 819 - -
Ahy12g1580 951 Pfam NB-ARC domain 196 425 IPR002182 GO:0043531
Ahy12g1580 951 SMART till_3 15 154 IPR000157 GO:0007165
Ahy12g1580 951 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 157 IPR035897 -
Ahy12g1580 951 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 696 - -
Ahy12g1580 951 Gene3D Ribonuclease Inhibitor 442 832 IPR032675 -
Ahy12g1580 951 PRINTS Disease resistance protein signature 623 639 - -
Ahy12g1580 951 PRINTS Disease resistance protein signature 290 304 - -
Ahy12g1580 951 PRINTS Disease resistance protein signature 215 230 - -
Ahy12g1580 951 PRINTS Disease resistance protein signature 382 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1580 Ahy-Chr12 84928879 84985065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1580 11 806 WRKY Transcription Factor Family AT4G12020 33.333 7.33e-114 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1580 - - ahf:112730190 1841.62