Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1549 ATGATGATACCCCAGTTGCATAGTATGATTGCAACAATAATAATTGTTGTTGTTGTTGCAAAGATAAATGTGGGAGTGAATTCAGCTCCAGAAGCTGATAAGGTAACCAATTTGCCAGGGCAACCACCAGTGAAGTTCCAGCAATATGCTGGTTATATTACAGTGGATGAGAAGCAACAAAGATCTTTGTTTTACTACTTTGCTGAAGCACAAGTTGAACCTGCTTCCAAGCCATTGGTTCTATGGTTAAATGGAGGGCCTGGCTGTTCTTCTGTTGGAGCCGGAGCTTTCGTCGAGCATGGTCCATTTAAACCAAGCGAAAATGTTCTTCTCAAGAATGATTATAGTTGGAACCAAGAGGCAAATATGCTGTACTTGGAATCACCGGCTGGTGTTGGTTTCTCCTACTCTGCCAATAAATCTTTCTATGAATATGTTAATGATGAAATGACAGCAAGGGATAATCTTGTATTCTTACAGAATTGGTTCACTAAATTCCCAGAGTACAAAAACAATGACTTCTTTATTACAGGGGAGAGTTATGCAGGTCACTATGTACCACAACTTGCACAACTCATTGTTCAAAGCAAGACAAAGTTCAATTTCAAGGGTATAGCAATAGGAAACCCTCTTATGGAATTCAACACAGATTTCAATTCAAGGGCAGAGTATTTCTGGTCCCATGGACTAATATCTGATTCAACTTATGAAATGTTCACTAAAGTCTGTAACTACTCCCAAATTAGGAGACAACTTCAAAGTGGAACATTAAATGGGGTTTGTGCAGCCGTAAATAAAATAGTGTCCACAGAAGTTGGGAGATATGTTGATGCATATGATATCACTCTTGATGTGTGCCTATCAGCAGCAGATCAACAAGCTTATGTGCTCAATCAACTTAGCCAAGTGCAAGAGGGAGAGAAGATTGATGTGTGTGTGGAAGATGAAACGATCACATATTTGAATAAAAAAGATGTGCAACAAGCTTTCCATGCTAAGCTTGAAGGGATCACTAGATGGTCAACTTGCAGCGACGTTCTCAAATATGATATGCAGAATCTAGAGGTTCCAACCATTTCTATCCTAGGAACACTAGTTAAGTCTGGTATTAGAGTTCTAGTATACAGTGGTGATCAAGATTCAGTTCTGCCATTAACGGGAACAAGAACGCTTGTGAATGGGTTGGCTAAGGAGTTAGGACTTAATACAACAGAGTCTTATAGAGCATGGTTTGGAGGAAGACAGGTAGCTGGATGGACACAAGTATATGGTGACATGTTATCGTTTGCTACTATAAGAGGAGCATCTCATGAAGCTCCTTTTTCACAGCCAGAGAGATCACTTGTGCTGCTGAAAGCATTTGTTGAAGGAAAATCTCTTCCGGGAATAATCTCTCTAACGTGA 1404 0.3989 MMIPQLHSMIATIIIVVVVAKINVGVNSAPEADKVTNLPGQPPVKFQQYAGYITVDEKQQRSLFYYFAEAQVEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENVLLKNDYSWNQEANMLYLESPAGVGFSYSANKSFYEYVNDEMTARDNLVFLQNWFTKFPEYKNNDFFITGESYAGHYVPQLAQLIVQSKTKFNFKGIAIGNPLMEFNTDFNSRAEYFWSHGLISDSTYEMFTKVCNYSQIRRQLQSGTLNGVCAAVNKIVSTEVGRYVDAYDITLDVCLSAADQQAYVLNQLSQVQEGEKIDVCVEDETITYLNKKDVQQAFHAKLEGITRWSTCSDVLKYDMQNLEVPTISILGTLVKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKELGLNTTESYRAWFGGRQVAGWTQVYGDMLSFATIRGASHEAPFSQPERSLVLLKAFVEGKSLPGIISLT* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1549 467 Gene3D - 312 347 - -
Ahy12g1549 467 Pfam Serine carboxypeptidase 39 457 IPR001563 GO:0004185|GO:0006508
Ahy12g1549 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Ahy12g1549 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Ahy12g1549 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Ahy12g1549 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Ahy12g1549 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Ahy12g1549 467 Gene3D alpha/beta hydrolase 29 288 IPR029058 -
Ahy12g1549 467 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Ahy12g1549 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 464 IPR001563 GO:0004185|GO:0006508
Ahy12g1549 467 Gene3D - 359 457 - -
Ahy12g1549 467 PANTHER CARBOXYPEPTIDASE 13 464 - -
Ahy12g1549 467 SUPERFAMILY alpha/beta-Hydrolases 35 460 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1549 Ahy-Chr12 83300623 83308322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1549 320 460 Calmodulin-binding Proteins AT2G22960 25.532 3.16e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1549 K16297 - gmx:100805028 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1549 12 83300623 83308322 Ahy12g1549 12 83300623 83308322 ECH