Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1530 ATGGCCTTTTCACCCACTGAAGAAGGATCAATTACTACATTCACCAATCCAACACTAGGCGATGAACAATTTAATATGGATGAATCAGACATTCAAGAACAAGTAGGGTGCAAATTCGACGAAATTACCAATGTCGTTGTGACTAGAAAGGATGAGCTGGACGATGGAGGCCAGTTGCCGGATCATAGTGGCATAGGTGAAGAGGAAATTCCAGTCGTGGGAATGAGTTTTGGTTCATTGCCTCTCGCACAGAAATTTTATGCAAACTATGCAAAGAAAGTTGGGTTTGTTACTAAAATCAGGAACACAAATTTTGACAAGACACGGAAGGAATCAAAGATACCGGTTAATCAATCTATTTACTACACGCGTGAAGGCTATCGAGAGTCTAGGGTGAACGCAGCAACTCGAGCAAATAGAATTACAGCCACGAGATGCAAAGCAAGGATGTATGTCGTGCTGGACAATGAGAATGAATGTTGGGTTGTGTCTAGATTAGAACTGAGGCATTCTCACCCTTGTTCGGCTGAGAAAGCTGTCCACTATCATGAGTACCGGGAGCTTACCATGCATGCTAAGTGCGTCATTACGGATAACGACGAGGCTGTAATAAGACCCAACAAGACGTATCTAGCACTGGCAAACGAGGTTGGTGGGTCCGCAAACCTGGGCTTTTCAGAAAAGGATGTCAGAAATTACATCACACGCAATCTCCGATGCTCCGATGACAACGAGGACTTCCAGGGGATGATGAATTATTTTGTTCGAATGAAGGAGATCAATCCCAACTTCTTCTATGCAATAGATGTTGACGATGCTAATAAGTTTAGGAGCGCACTTTGGGTAGATGCAAGGTGCAGGGCTTCGTATGAATATTACGGAGATGTGGTGTCGTTTGACACCACATACAGAAGAAACAGGCATGGTTTGCCGTTTGCATCCTTTGTAGGTGTAAACCACCATGGGAAGTCTACTCTTCTTGGCTGTGCTTTACTTGGGAGAGAGGAGATCCCTAGTTTTGAGTGGGTGTTCACGCATTGGGTGAGATGCGTCGGATCTGCACCAAGGGGGATTATCACTGACCAGTGCAAGGCGATGACTGGAGCTATTAGGAATGTCCTACCTGACACTGTCCACCGATGGTGCATCTGGCACATAATGAAAAAATCACAATTCAAGCTTGGTGGATATGCTAGGTACGGAGAACTGCATGCAGTGATGAATCACATTGTGTGGAATTCTCCTTCGACTGAATCATTCGAGTCTGATTGGGCTGGTTTCATCAAACAATTCAAGTTAGGCCAAAACAGATGGTTAGCAGACCTTTACGCGAATCGACGGAAGTGGGTTCCAATATTTTTCAAGAGTGAATTTTGGGCAGGCATGAGGAGTACACAGCGTAGTGAAAGTATGCACGCATTTTATGGTGGATACCTGCATTGCAAGAGTGTGTTGGTTCAGTTCGTCCATGAATACGACAATGTCCTCGGAACCAAAGAGCAAAAGGAGCTGGAAGATGATGCTGCAGACTCGAAAGGTTTTATCCCATGTATAGGGAGCACGGGCATTGAGAGACAGTTTCAGCAGGAATACACCAGTAGTATGTTCAGGATTCTTCAACTGGAGGTAAGAAAAAAAACCGATTGCGTGGTTCGGTCAATTGAAAAAAAAGGAGATACAATTTCTATTACGGTGGACGAGCAGAAGTTTTTCTGGGGGAAGCCAGTCTACCATACTTTTAGGGTCGACTTTGACCCTTTGAGTCAAAAGGGTCAGTGCGAGTGCAACAAGTTTGAATCCGCTGGTATATTGTGTTGCCACACCCTTACGGTCTGGTCATACTACAGAGTTGACATAGTACCGAGCTGCTACGTTCTTCCTCGATGGAGTAAGAATGTCATCCGCAAGCACACTTATGTCAAGAGTAGCCATGACGTGGCTCGGAGTGACGAAAGCAACAACTTGTTCAGGCATCTGTGTTCAGAGTTCTATAACGTTGCGCAGGAGTTTGTTGCTTGTGATGAGGAAGCAGCCATCTTGCGAGTTGCCCTTTGGGATGCAAAGTCTAAGCTGATTGATTATCGTGCCAGCATGCGTTCCAATACTGCTGCTGCGTCTCAGAATACCGTGCCCACACAGAGCACGGGCGGTGCGGTTGTACATGACATTCAGGGACCCTCAAGAGTCAAGACCAAAGGACGGCCTAAGGGTAAGAGACTTGGAGCAGAGTTGGACAAGTCAATTAAGAAATCAATGCAAAAAAGGAATAGGAAATCACACCCGGATGAGGTTCACCTTCCGTCAGATAATGATCATCATGGATCCCTTAATAAAAGATGTGAGGATTCTACTATGTGGAACTCATCAGAAGGTGGCGGATTCATGCACCTGTTGAATTCCTTTAGGCATATATAG 2415 0.4526 MAFSPTEEGSITTFTNPTLGDEQFNMDESDIQEQVGCKFDEITNVVVTRKDELDDGGQLPDHSGIGEEEIPVVGMSFGSLPLAQKFYANYAKKVGFVTKIRNTNFDKTRKESKIPVNQSIYYTREGYRESRVNAATRANRITATRCKARMYVVLDNENECWVVSRLELRHSHPCSAEKAVHYHEYRELTMHAKCVITDNDEAVIRPNKTYLALANEVGGSANLGFSEKDVRNYITRNLRCSDDNEDFQGMMNYFVRMKEINPNFFYAIDVDDANKFRSALWVDARCRASYEYYGDVVSFDTTYRRNRHGLPFASFVGVNHHGKSTLLGCALLGREEIPSFEWVFTHWVRCVGSAPRGIITDQCKAMTGAIRNVLPDTVHRWCIWHIMKKSQFKLGGYARYGELHAVMNHIVWNSPSTESFESDWAGFIKQFKLGQNRWLADLYANRRKWVPIFFKSEFWAGMRSTQRSESMHAFYGGYLHCKSVLVQFVHEYDNVLGTKEQKELEDDAADSKGFIPCIGSTGIERQFQQEYTSSMFRILQLEVRKKTDCVVRSIEKKGDTISITVDEQKFFWGKPVYHTFRVDFDPLSQKGQCECNKFESAGILCCHTLTVWSYYRVDIVPSCYVLPRWSKNVIRKHTYVKSSHDVARSDESNNLFRHLCSEFYNVAQEFVACDEEAAILRVALWDAKSKLIDYRASMRSNTAAASQNTVPTQSTGGAVVHDIQGPSRVKTKGRPKGKRLGAELDKSIKKSMQKRNRKSHPDEVHLPSDNDHHGSLNKRCEDSTMWNSSEGGGFMHLLNSFRHI* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1530 804 Pfam FAR1 DNA-binding domain 85 174 IPR004330 -
Ahy12g1530 804 MobiDBLite consensus disorder prediction 736 779 - -
Ahy12g1530 804 ProSiteProfiles Zinc finger SWIM-type profile. 578 616 IPR007527 GO:0008270
Ahy12g1530 804 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 62 654 IPR031052 GO:0006355
Ahy12g1530 804 MobiDBLite consensus disorder prediction 702 720 - -
Ahy12g1530 804 MobiDBLite consensus disorder prediction 702 784 - -
Ahy12g1530 804 MobiDBLite consensus disorder prediction 1 21 - -
Ahy12g1530 804 Pfam MULE transposase domain 296 389 IPR018289 -
Ahy12g1530 804 PANTHER OS03G0843700 PROTEIN 62 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1530 Ahy-Chr12 81836299 81840046 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g1530 MULE 2.70E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1530 - - ahf:112730161 1667.9