Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1516 ATGGCAGCGACACGTGGTTCGACGGCTAACTCCAAGACGTGGCGCGGTGCGGTGGTGGCGCAGGGCATAGAATGTACAGAAATTACTGAGTTGGGATGTGATGACATGGAACTTGTTGATGAGTTACCAGACCATAGTTGCCTTCCTGACGATAAAATACCGATAGTTGGAATGCGGTTTGAGTATTTGAAGTTGGCCCATGATTTTTATGCGACCCATGCAAAAAAAGTTGGTTTCATAAGTAAGATACGGGCCACAAATTTTGATAGGATGACAAAGCAACCGATCAACCAATCTATCCATTGCAATCGGGAGGGTTTCTGGGCATCTCGTGTCAAGGCACCCAGACGGAAGAACACAATGGCAGGTGTGGGATGCAGAGCAAGAATATATACAAAATTCGACAGGGAAAATCATGATTGGATCTTGTTGAAGGTTGAACTAAATCACTCGCACCCATGTTCAACTAAGAAGGCGGTGCACTACCACGAGAACAGGGAGTTAACAATGCATGTGAAGTGTATCATTAAGGTTAATGATGAGGCGGGCATTCGACCCAACAAGACCTTTCTAGCATTAGCCAATGAAGTTGGTGGGCCTTTGAACTTGGGCTTCTCAGAGAAGGACGTCAGGAATTACATTTCATTAAGACTCCGATCCACAAATGTCAACACAGATGTCAAGGAGATGCTGAACTACTTCATGCGAATGAAGGAGTTGAATCCGAACTACTTTTACGTAGTGAATATAAATGAGGATAACAAGTTTACGAGTGCAGTTTGGGTGGATGCAAGGTGTAGGGCATCTTATGAATACTATGGAGACGTGGTCTCATTTGTTACCACATACAGCACGAACTGGCATGGATTGCCGTTCGCTGCTTTCATTGGTGTGAACTACCATGGTAAGTCTACTTTGCTAGGCTGCACTCTGCTAGGCAGTGAGGAGATCCTGAGTTTTGAGTGGGTGTTCACCCAATGGCTGGAGTGCATGGTAACGGCACTGAAGGGCATCATCACAGACCAATGCAAGTCTATGTTTGGTGCAATTAAGAAGTCAGTTGAGGATTTCGAGGATCATTGGGCTGAGTTCATTGATGACTTCAACTTACATCACAACAGATGGCTATCAGATCTGTTTGAGGACCGACACATGTGGGTGCCTATCTTTTTCAATGGTCAATTCTGGGCTTCCATGAGGAGTACGCAGAGGAGTGAGGGGATGCATTCATTCTTTGGTGGATACTTAAATTGTAAGACTAGTTTGGTCCAGTTCGTCCACGAGTTCGACAATGTCCTAGGAACGAAGGAGCAGAAGGAATTGGAGGACGATGCTGCAGACTCGAGAGGTCTAATCCCATGTTCAACTAGATCAGCCATCGAGAGACGATTTCAAAAAGAGTATACCAACGAGATGTTTAGAGATGTCCAAATGGAATTTGGCAAGAAGGCTGATTGCACTATTCGTGCCATGGATGAACAGGGTGACTCGGCTTGGGTAAAGGTGGAAGAGGAAATACTAGTCTATCAAACGACCCGTTATGTTACGTTTGACGTCCATTTTCACCGTTCGACTCACAAGGTTCGATGTGATTGCAACTTGTTTGAAAGTGCAGGTATATTATGTTGCCACTGTCTTGTAGTACTTTCATCTTACAAAGTTAATGAGGTTCCTTCCTGCTATGTTTTACCTCGTTGGAGCAATAACATAAAGCACAAGCACACCTACATTAAGAGTAGCCACGACGTTAGACGTTCAGATGAAAGCCACAACATATTTAAAGGACATCTGCATAATGTTCTGGAGGATACAAGGGCCAAGCTAGTAGATTACCGTGGCAGGATGCAAAATAACACCGTCCCTACTGCACACAATAGCATCGTCACAGTCCCTTCAACCATTTTTGGCACAGCGGACATTCAGGCCCCATCAAAGGTAACCACTAAGGGTCGTCCAAAAGGCAAAAGGCTAGGATATGAGTTGGATAAATCAATCAAAAAATCCATGCAGAGAAAGCGGAAGAGTTTACGCAACGATAATCGTTTAGAATCTACTGCAAATCAAGATTCGGAGGCTTCCGCTCAGCAGATTGCTACGCAAGGACTTGGTGGATTCATGTCGCTGTTAAACTCCTTCGACAATACCTAG 2148 0.4469 MAATRGSTANSKTWRGAVVAQGIECTEITELGCDDMELVDELPDHSCLPDDKIPIVGMRFEYLKLAHDFYATHAKKVGFISKIRATNFDRMTKQPINQSIHCNREGFWASRVKAPRRKNTMAGVGCRARIYTKFDRENHDWILLKVELNHSHPCSTKKAVHYHENRELTMHVKCIIKVNDEAGIRPNKTFLALANEVGGPLNLGFSEKDVRNYISLRLRSTNVNTDVKEMLNYFMRMKELNPNYFYVVNINEDNKFTSAVWVDARCRASYEYYGDVVSFVTTYSTNWHGLPFAAFIGVNYHGKSTLLGCTLLGSEEILSFEWVFTQWLECMVTALKGIITDQCKSMFGAIKKSVEDFEDHWAEFIDDFNLHHNRWLSDLFEDRHMWVPIFFNGQFWASMRSTQRSEGMHSFFGGYLNCKTSLVQFVHEFDNVLGTKEQKELEDDAADSRGLIPCSTRSAIERRFQKEYTNEMFRDVQMEFGKKADCTIRAMDEQGDSAWVKVEEEILVYQTTRYVTFDVHFHRSTHKVRCDCNLFESAGILCCHCLVVLSSYKVNEVPSCYVLPRWSNNIKHKHTYIKSSHDVRRSDESHNIFKGHLHNVLEDTRAKLVDYRGRMQNNTVPTAHNSIVTVPSTIFGTADIQAPSKVTTKGRPKGKRLGYELDKSIKKSMQRKRKSLRNDNRLESTANQDSEASAQQIATQGLGGFMSLLNSFDNT* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1516 715 Pfam FAR1 DNA-binding domain 68 155 IPR004330 -
Ahy12g1516 715 PANTHER OS03G0843700 PROTEIN 355 628 - -
Ahy12g1516 715 SMART 26again6 528 555 IPR006564 GO:0008270
Ahy12g1516 715 MobiDBLite consensus disorder prediction 665 693 - -
Ahy12g1516 715 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 354 IPR031052 GO:0006355
Ahy12g1516 715 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 355 628 IPR031052 GO:0006355
Ahy12g1516 715 ProSiteProfiles Zinc finger SWIM-type profile. 515 553 IPR007527 GO:0008270
Ahy12g1516 715 Pfam MULE transposase domain 277 352 IPR018289 -
Ahy12g1516 715 PANTHER OS03G0843700 PROTEIN 32 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1516 Ahy-Chr12 80501338 80511337 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g1516 FAR1 6.80E-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1516 - - aip:107627325 1480.31