Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1489 ATGGATAACTATTTGAAGGAGTTCGAATTGGAACCGAAGGATCGTTCCATCGAAGCACTAAGTAGATGGAGATCTGCGGTCTCAGCCTGGGTCATCAAGAATCGCCGCAGGAGGTTCCGCAATGTTGTAGATCTCGTTAAACTAACACTCGCCGAGGAGAAGAAGAAGAAAATACAGCATAAACTAAGGAGCATTCGGGTTGCTGTCCATGTTCATCGGGCAAAAGATCTTTTAAAGAATGCTATTAGTTCAGCAGTTGAATACGAGCTATCGGAAAAGACAAGAGAATCTGGTTTCAGAATTGAACCAGATGATATAGCAACGCTTGTTTCTGCCCATGATCTAAAGAATTTTAAAAAAATTGGCGGAGCTGAAGGGATTGCGAGGAAACTCTCAGTCTCCGTGAACGATGGCGTTAGCCAAGATAGTATACATAACAGGCAACAAATTTATGGACTTAACCACTACACGGAGAGACCTTCAAAATCTTTCTTGATGTTTGTTTGGGAGGCATTGCATGACTTAACACTAATCATTCTCATAGTTTGTGCTCTAGTTTCTATAGCTATAGGGCTTCCCACTGAAGGATGGCCAAAGGGTGTTTATGATGGTCTTGGTATCATACTTAGTGTGTTTTTGGTTGTTACTGTTACTGCTATTAGTGACTACCAGCAATCCTTGCAATTCAGGGATTTGGACAAAGAGAAGAAAAAGCTCTTTGTCCAGGTGACCAGGGATGGGAAGAGACAGAAGGTTTCTATCTACGATTTGGTAGTCGGAGATATTGTCCATTTGTCAACTGGTGATCAAGTTCCAGCTGATGGAGTTTTTGTAACTGGATACTCATTACTAATTGATGAATCAAGTTTGTCAGGTGAGAGTGAACCAGTAAATATAGATGAACAAAAACCTTTTCTTCTTGCGGGAACCAAAGTGCAGGATGGTCAGGGAAAGATGATAGTTACAACAGTTGGCATGAGGACTGAATGGGGGAAGTTGATGGAAACTTTAAGCGAGGGAGGTGAGGAGGAGACTCCATTGCAAGTGAAATTGCATGGAGTTGCAACAATTATTGGTAAAATCGGGTTGGCTTTTGCCGTGTTGACATTTATCGTGTTGACAATAAGGTTTCTTGTTGAGAAAGCAGTCTCTGGTGACTTTGGTAGTTGGTCTATGAATGATGCAATGAAACTGCTGGACTACTTTGCTATTGCAGTGACCATAATAGTTGTCGCAATTCCGGAAGGATTACCATTAGCTGTGACACTTAGTCTTGCTTTTGCAATGAAAAAATTAATGAATGACAAGGCACTTGTGAGACATCTTTCGGCATGTGAGACTATGGGTTCTGCAAGTTGCATTTGCACAGATAAGACAGGAACATTGACCACTAACCATATGGTTGTGAACAAGATTTGGGTATGCGAAAAAGTGGCCGAGATCAAAGGTAGTGAGAGTGCAGAGAAGCTGAAAACAGAGATACCTGAGGAAGTAATGAGCATCCTTTTGCAGGCTATATTTCAAAATACATCTTCTGAAGTAGTTAAGGATGAAACCGGAAATAACACAATATTGGGAACACCAACAGAATCAGCATTGTTGGAATTTGGTTTGCTCACAGGTGGTGATTTTGATGCACAGCGCAGTACCTATAAGATAATTAAGGTTGAGCCTTTCAATTCAGTTCGGAAGAAGATGTCTGTGCTTGTGAGTCTTCCTAATGGAGGGGTCAGAGCTTTCTGCAAAGGAGCATCAGAAATAATACTAAGAATGTGTGACAAAATCATTGATTCTAATGGAAATGCTGCTGATCTTCCTGAAGAACAGGCGAATAAAGTTAACGATGTCATAAACGATTTTGCCTCTGAAGCTCTGAGAACTCTTTGTTTGGCTGTTAAAGATATAGACGCAACAGAAGGGGAAAACAGTATCCCTGATCATGGCTATACTCTGATAGCAATTGTAGGAATCAAGGATCCTGTGCGGCCTGGGGTCAGGGAAGCTGTTCAAACTTGTTTAGCAGCTGGAATAACCGTCCGTATGGTGACCGGTGATAACATAAATACAGCTAGAGCCATAGCTAAAGAATGTGGTATACTCATCGAGGGTGGTGTAGCTGTAGAAGGACCAGAGTTTCGAAACTTGTCGCCAGAGCAAATGAGAGATATCATACCAAATATTCAGGTAATGGCACGTTCCCTACCGCTTGACAAGCACACCTTAGTATCCAATTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTAACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGGCAGACATTGGACTTGCCATGGGGATCGCTGGAACTGAGGTTGCCAAAGAAAATGCTGATGTGATTATAATGGATGATAACTTCACTACTATCGTTAACGTGGCCAAATGGGGACGTGCCATATACATAAACATACAAAAATTTGTGCAGTTTCAGCTAACTGTAAATATTGTTGCTCTGGTTATCAACTTTGTTTCTGCATGCATCACTGGATCTGCACCACTCACAGCTGTTCAGTTGCTTTGGGTAAATTTGATTATGGACACATTGGGTGCATTGGCTCTGGCTACTGAGCCTCCCAATGATGGACTAATGGAAAGACCCCCGGTTGGAAGAAAAGCAAGTTTTATCACCAAACCAATGTGGAGGAACATCTTTGGTCAGAGTTTGTATCAATTGATTGTCCTTGCACTTCTCAATTTTGATGGGAAGAGGCTACTGGGACTTACTGGTTCAGATGCAACTCAAGTGCTCAACACTTTGATCTTCAACTCCTTTGTATTTTGCCAGGTATTCAATGAGATAAACAGCAGAGAAATTGAAAAGATAAACATATTCAGAGGCATGTTCGACAGCAAGATATTCTTTGCTGTCATTTTCTCGACAGTGGCATTTCAAGCAATCATAGTCGAGTTCCTGGGAACCTTTGCGAGCACGGTACCTCTGAACTGGCAGCACTGGTTGCTCAGTGTGTTAATTGGAGCAGTCAGCATGCCCATATCTGCTATTCTCAAGTGCATTCCAGTTGAAAGAGACACAACTACAAAGCACCATGATGGTTATGAAGCACTTCCTTCTGGTCCGGAGCTTGCTTAA 3120 0.4205 MDNYLKEFELEPKDRSIEALSRWRSAVSAWVIKNRRRRFRNVVDLVKLTLAEEKKKKIQHKLRSIRVAVHVHRAKDLLKNAISSAVEYELSEKTRESGFRIEPDDIATLVSAHDLKNFKKIGGAEGIARKLSVSVNDGVSQDSIHNRQQIYGLNHYTERPSKSFLMFVWEALHDLTLIILIVCALVSIAIGLPTEGWPKGVYDGLGIILSVFLVVTVTAISDYQQSLQFRDLDKEKKKLFVQVTRDGKRQKVSIYDLVVGDIVHLSTGDQVPADGVFVTGYSLLIDESSLSGESEPVNIDEQKPFLLAGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEEETPLQVKLHGVATIIGKIGLAFAVLTFIVLTIRFLVEKAVSGDFGSWSMNDAMKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWVCEKVAEIKGSESAEKLKTEIPEEVMSILLQAIFQNTSSEVVKDETGNNTILGTPTESALLEFGLLTGGDFDAQRSTYKIIKVEPFNSVRKKMSVLVSLPNGGVRAFCKGASEIILRMCDKIIDSNGNAADLPEEQANKVNDVINDFASEALRTLCLAVKDIDATEGENSIPDHGYTLIAIVGIKDPVRPGVREAVQTCLAAGITVRMVTGDNINTARAIAKECGILIEGGVAVEGPEFRNLSPEQMRDIIPNIQVMARSLPLDKHTLVSNLRNMFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVAKWGRAIYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMERPPVGRKASFITKPMWRNIFGQSLYQLIVLALLNFDGKRLLGLTGSDATQVLNTLIFNSFVFCQVFNEINSREIEKINIFRGMFDSKIFFAVIFSTVAFQAIIVEFLGTFASTVPLNWQHWLLSVLIGAVSMPISAILKCIPVERDTTTKHHDGYEALPSGPELA* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1489 1039 PANTHER CATION TRANSPORTING ATPASE 59 1023 - -
Ahy12g1489 1039 Pfam E1-E2 ATPase 241 433 - -
Ahy12g1489 1039 ProSitePatterns E1-E2 ATPases phosphorylation site. 457 463 IPR018303 -
Ahy12g1489 1039 SFLD p-type atpase 437 809 IPR044492 -
Ahy12g1489 1039 PRINTS P-type cation-transporting ATPase superfamily signature 455 469 - -
Ahy12g1489 1039 PRINTS P-type cation-transporting ATPase superfamily signature 286 300 - -
Ahy12g1489 1039 PRINTS P-type cation-transporting ATPase superfamily signature 780 792 - -
Ahy12g1489 1039 PRINTS P-type cation-transporting ATPase superfamily signature 653 664 - -
Ahy12g1489 1039 PRINTS P-type cation-transporting ATPase superfamily signature 675 685 - -
Ahy12g1489 1039 PRINTS P-type cation-transporting ATPase superfamily signature 756 775 - -
Ahy12g1489 1039 Pfam haloacid dehalogenase-like hydrolase 453 770 - -
Ahy12g1489 1039 SUPERFAMILY Calcium ATPase, transduction domain A 240 336 IPR008250 -
Ahy12g1489 1039 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 392 488 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy12g1489 1039 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 723 844 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy12g1489 1039 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 549 700 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy12g1489 1039 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 207 377 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy12g1489 1039 Gene3D - 15 76 - -
Ahy12g1489 1039 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 461 665 IPR023299 GO:0000166
Ahy12g1489 1039 CDD P-type_ATPase_Ca_PMCA-like 146 889 - -
Ahy12g1489 1039 SFLD Haloacid Dehalogenase 437 809 - -
Ahy12g1489 1039 Pfam Cation transporting ATPase, C-terminus 841 1014 IPR006068 -
Ahy12g1489 1039 SUPERFAMILY HAD-like 454 861 IPR036412 -
Ahy12g1489 1039 Gene3D - 170 1015 - -
Ahy12g1489 1039 Gene3D - 452 801 IPR023214 -
Ahy12g1489 1039 Gene3D - 138 338 - -
Ahy12g1489 1039 Gene3D - 465 660 IPR023299 GO:0000166
Ahy12g1489 1039 Pfam Cation transporter/ATPase, N-terminus 122 187 IPR004014 -
Ahy12g1489 1039 SMART Cation_ATPase_N_a_2 117 192 IPR004014 -
Ahy12g1489 1039 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 114 1018 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Ahy12g1489 1039 PANTHER CALCIUM-TRANSPORTING ATPASE 59 1023 - -
Ahy12g1489 1039 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 1017 IPR023298 -
Ahy12g1489 1039 PRINTS H+-transporting ATPase (proton pump) signature 613 631 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy12g1489 1039 PRINTS H+-transporting ATPase (proton pump) signature 756 772 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy12g1489 1039 PRINTS H+-transporting ATPase (proton pump) signature 788 813 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy12g1489 1039 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 47 IPR024750 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1489 Ahy-Chr12 76137083 76150549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1489 65 1036 Primary Pumps ATPases AT3G57330 71.942 0.0 1462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1489 K01537 - gmx:100785768 1666.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1489 12 76137083 76150549 Ahy12g1489 12 76137083 76150549 ECH
Ahy16g0445 16 8358585 8368588 Ahy12g1489 12 76137083 76150549 PCT
Ahy6g0887 6 11318188 11327722 Ahy12g1489 12 76137083 76150549 PCT
Ahy12g1489 12 76137083 76150549 Ahy16g0445 16 8358585 8368588 PCT
Ahy12g1489 12 76137083 76150549 Ahy6g0887 6 11318188 11327722 PCT