Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1448 ATGAAATTAACAAAATGTCCCTCCCTAATCCCTACACGTGCCTCACCATCTCTTGTTCTCAGTCCCTCAATATCTCAAAGCCTCATACCTACTTGCGCTGGGGTTTCTTTCCTTTCGTCTCAGTTTCAGCTACTGCAACAACTTTCTGTGACCCAAAAAGTTGCAAAGTTGAAAGCATTCGAGCTAGGAATGGAGGTTCTTGGTACCGTCGATGACCTCTTGGATTTCTCATCCGACGTAGGTGAGGATAATGATGCTGTTGTTGACAGACGCAGGAAAGGATTTCCTTGTAACCCAGAATGCAAGCAACCTTCATTCAATCCATTGGCCATGGATGATCCTAACTATTCATTCTCTGAGTTCGCCGAGGAAGAGCTTGAATGGTTGTCCAATAAAGACGCATTTCCTGCTGTCGAAACATTTGTCGACATACCATCTATTCAGCCTAACATGTCAAAGCACCAAGGGACAGCCTCAGTGCTTGAATATAGAAGGAGCATCCCCAATAATAACTGCACTAACAACATTACACTCTTAAACGGCTTTGATCACCTGAAGGTCCCTGTCCGAGCAAGGAGCAAGTGTCGTAGTAGGCCTCGCCTGGCTATTGCTGACGTCTCAAGTCATCAGTCCTGGTGGAGACTATCTAGTAGAGAAATTTCCGGAGTAGAAGTGATAAAAATCCCAACCATTGGGAGGAAATGTCAGCACTGTGGATCTGAAGAAACTCCACAGTGGCGATCAGGTCCGCTTGGGCCAAAAACACTTTGTAATGCCTGTGGGGTTAGGTTCAAGTCTGGTCGACTGGTCCCCGAGTACCGTCCTGCAACCAGCCCAACTTTTCGTCACGAGTTGCATTCTAATTCCCATAGGAAGATTATCGAGATGAGGAAGCAGAAGCAAATGGGAATGGTTTGA 918 0.4619 MKLTKCPSLIPTRASPSLVLSPSISQSLIPTCAGVSFLSSQFQLLQQLSVTQKVAKLKAFELGMEVLGTVDDLLDFSSDVGEDNDAVVDRRRKGFPCNPECKQPSFNPLAMDDPNYSFSEFAEEELEWLSNKDAFPAVETFVDIPSIQPNMSKHQGTASVLEYRRSIPNNNCTNNITLLNGFDHLKVPVRARSKCRSRPRLAIADVSSHQSWWRLSSREISGVEVIKIPTIGRKCQHCGSEETPQWRSGPLGPKTLCNACGVRFKSGRLVPEYRPATSPTFRHELHSNSHRKIIEMRKQKQMGMV* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1448 305 ProSiteProfiles GATA-type zinc finger domain profile. 229 265 IPR000679 GO:0006355|GO:0043565
Ahy12g1448 305 PANTHER GATA TRANSCRIPTION FACTOR 1 70 301 - -
Ahy12g1448 305 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 231 292 - -
Ahy12g1448 305 PANTHER GATA TRANSCRIPTION FACTOR 70 301 - -
Ahy12g1448 305 Gene3D - 230 302 IPR013088 GO:0006355|GO:0008270
Ahy12g1448 305 SMART GATA_3 229 279 IPR000679 GO:0006355|GO:0043565
Ahy12g1448 305 CDD ZnF_GATA 234 282 IPR000679 GO:0006355|GO:0043565
Ahy12g1448 305 ProSitePatterns GATA-type zinc finger domain. 235 260 IPR000679 GO:0006355|GO:0043565
Ahy12g1448 305 Pfam GATA zinc finger 235 268 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1448 Ahy-Chr12 70663092 70666682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1448 231 303 C2C2-Gata Transcription Factor Family AT3G24050 83.562 1.16e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Ahy12g1448 GATA 1.30E-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1448 - - ahf:112727508 603.979