Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1446 ATGGTCTCAAAAATTAAGATGTCAAAAGGGTATTCTGTGATTGTACTCTTACTATTATTTTTATCTCTGATTCTTTGCACGGCCGAAGGGTTGAACGCAGAGGGGCAAATCCTCCTAGACCTCAAGAATGGTTTCCATGATAAGAATAATCTTTTGCGGAATTGGAACCCTGCTGATGAAACTCCATGTGAATGGTTAGGCGTAAATTGCTCTTATTATGAATATAATAATAGTAAAAGTCCAGTTGTCATGTCCCTTGATTTGAGTTCAATGGGTCTTTCTGGAATTTTAAATGGTAGTAGCATTGGAGGTTTGACTCACCTAACTTATCTCAATCTTTCTCACAATAAGTTGAGTGGAAAAATACCAAAGGAAATTGGCGATTGCTTGAATTTGGAGTATCTTTACTTGAACAATAACCAATTTCAGGGACCAATTCCTGATGAACTGGGGAATTTGTCTCGTTTGAGAAGCTTGAACATATGCAACAACAAACTCAATGGTGTTTTTCCAGATGAGTTTGGGAACTTGTCTTCATTGGTTGAATTGGTAGCCTATAGCAATTTTCTTGTTGGTCCCTTGCCTAGTACCATTGGGAAGCTCAAGAATCTTGTGACTTTCAGAGCCGGGGCGAATAACATTACCGGTTCACTGCCAAAGGAAATAAGTGGGTGCGCAAGCTTGATGTATCTCGGTCTTGCGCAAAATGATATATCAGGGGAGCTTCCAAGTGAGATTGGGATGCTTCAGAATTTAACAGAATTGATTCTATGGGACAATCAGTTATCAGGGCCTATTCCCAAAGAGATTGGGAATTTAACCAATCTTGAGATTCTTGCTTTGTATTGGAATGATCTTGTTGGACCTATACCTCCAGAGATTGGGAACCTCAAGTCATTGAAGTTTTTGTATCTATACAAAAACAATCTGAATGGAACCATTCCAAGGGAAATTGGGAACCTTTCTTCTGCTAGGGAAATTGATTTCTCAGAGAACTCTTTAGTAGGGTACATCCCATCCGAGCTGAGCAAAATCCGTGGCCTGCGCTTGCTCTTTCTTTTCGAGAACCATTTAATTGGTGTCATACCGGATGAGCTCAGTAGCTTGAGGAATCTGTCAAGGCTCGACCTGTCGATGAATGGCCTTACCGGCTCGATTCCTTCAGGATTTCAATACTTGACTAATATGTCCCAGTTGCAGCTCTTTGACAACAAGTTGAGTGGTGTTATCCCTCAAGAACTTGGACTTCATAGTCCTCTTTGGGTGGTTGATTTCTCTGATAACAATTTGACAGGAACAATACCTCCTCATCTATGCTGGAATTCTCATTTGATGTTGTTGAACCTTCAATCGAACCGGTTTTATGGAAACATACCAAGAGGGATACTCAAGTGCAAGTCATTAGCGCAGATGCTTGTAGTTGGAAACATGCTTACAGGTGGCTTCCCTTCAGAACTCTGCAAACTGCCAAACTTCATCGCCATCGAGTTGAACGAAAACAAGTTCAGTGGTCCGATTCCTCCTGTGATCGCGAACTGCAGTAAATTACAAAGGCTTCACATAGCAAACAATTACTTCACACTGGAGTTACCTAAGGAAATTGGAAATCTTTCTCAGCTGGTGACCTTCAATGTTTCATCAAACCACTTCACTGGAACAATCCCATCCGAAATCTTTAGGTGCCAGAAGCTGCAAAGGCTGGATCTCAGTAAGAACAAGTTTATTGGTTCCTTGCCCAACAACATAGGAACACTTGAACATTTGGAGATTCTCAAACTCTCTGGCAATGAACTCTCTGGAAAAATCCCTGAAGAAATAGGTAATCTATCTCATTTGAACTGGCTGCAACTGGATGGCAATTTGTTTTCCGGCGAAATTCCGGCTCAGCTCGGTCGCCTCTCGACCTTGCAGATTGGAATGGATCTCAGTTACAATAATCTTTCTGGGAGAATACCATCTCAGCTCGGTAATCTCAATATGCTTGAGTATATCTATCTCAATAACAATCATTTGGATGGCGAAATTCCAAGCTCATTCGACCAGCTTTCAAGCTTGCTGGGATGCAATTTCTCATACAACAACCTCTCCGGACCAATACCTTCAGATAAGATCTTCCAAAATATGGCTGCAAGCAGTTTTCTTGGTGGTAACAACGACCTCTGTGGTAGACCTCTCAATGAATGCAACTCCGATCTGTCTTCTCGTGGTTTTCCTCCGGTTAGACATGATGATTCTCGCCGTGCTAAAATAGTCATGATCGCTGCAGCCACCGTGGGCAGCGTTTCTCTCATCTTAATTTTAGTTATTTTATATGTTATGAGATGGCCGTTCAATTCCACGAGTTCCTTGAGAGACACGGAATCTCCCTGCCTTGATTCGGATATCTATTTTCCTCCGAAGGACGGCTTCACATTCCAGGATCTTGTTGAGGCAACGAAAAGATTTCATGAGAGCTATGTGATTGGCAGGGGAGCCTGTGGGACGGTTTACAAGGCGGTGATGAAGTCCGGGAAGACGATTGCAGTTAAGAAGTTAGCATCAAACAGGGAAGGGAACAACATTGAGAATAGTTTTAGAGCTGAGATACTGACACTGGGGAAGATTCGGCATAGAAACATTGTGAAGCTTTATGGATTCTGCTATCACCAAGGCTCCAATCTGCTGCTTTATGAGTACATGGAGAGGGGAAGCTTAGGTGAAGTGTTGCATGGTTCTGCTACCAATTTGGAGTGGCCAATTCGGTTCATGATTGCTCTTGGTGCTGCTGAGGGTCTTGCCTACTTGCACCATGATTGCAAGCCAAAGATTATTCACCGGGATATAAAATCTAATAACATTCTTCTTGATGAAAATTTTGAGGCTCATGTTGGTGATTTTGGGTTAGCCAAAGTGATTGACATGCCACAATCAAAATCCATGTCTGCAGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATACACCATGAAGGTAACAGAAAAGTGTGACATTTATAGCTATGGCGTTGTGCTCTTGGAACTGCTAACAGGTAGAGCACCGGTTCAACCATTGGAGCAAGGTGGTGATCTTGTGACATGGGTTAGAACCCATATTCGGAGCCACAACAACGTGTTGACGCAGGGAATACTCGACAATCGCATTGATCTTGAAGAACAAGTCACTGTGAATCACATGCTGACTGTTCTGAAGATTGCTCTGCTTTGCACAAGCATGTCTCCTTCTGAGAGGCCTTCGATGCGCGAAGTCGTGTTGATGCTTATCGAGTCGAATGAACGCGAAGGAAACTTAACGCTCACTCGGACTAACCATGATCTTCCTTCCAAAGATGCCACACATTAG 3345 0.4266 MVSKIKMSKGYSVIVLLLLFLSLILCTAEGLNAEGQILLDLKNGFHDKNNLLRNWNPADETPCEWLGVNCSYYEYNNSKSPVVMSLDLSSMGLSGILNGSSIGGLTHLTYLNLSHNKLSGKIPKEIGDCLNLEYLYLNNNQFQGPIPDELGNLSRLRSLNICNNKLNGVFPDEFGNLSSLVELVAYSNFLVGPLPSTIGKLKNLVTFRAGANNITGSLPKEISGCASLMYLGLAQNDISGELPSEIGMLQNLTELILWDNQLSGPIPKEIGNLTNLEILALYWNDLVGPIPPEIGNLKSLKFLYLYKNNLNGTIPREIGNLSSAREIDFSENSLVGYIPSELSKIRGLRLLFLFENHLIGVIPDELSSLRNLSRLDLSMNGLTGSIPSGFQYLTNMSQLQLFDNKLSGVIPQELGLHSPLWVVDFSDNNLTGTIPPHLCWNSHLMLLNLQSNRFYGNIPRGILKCKSLAQMLVVGNMLTGGFPSELCKLPNFIAIELNENKFSGPIPPVIANCSKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNHFTGTIPSEIFRCQKLQRLDLSKNKFIGSLPNNIGTLEHLEILKLSGNELSGKIPEEIGNLSHLNWLQLDGNLFSGEIPAQLGRLSTLQIGMDLSYNNLSGRIPSQLGNLNMLEYIYLNNNHLDGEIPSSFDQLSSLLGCNFSYNNLSGPIPSDKIFQNMAASSFLGGNNDLCGRPLNECNSDLSSRGFPPVRHDDSRRAKIVMIAAATVGSVSLILILVILYVMRWPFNSTSSLRDTESPCLDSDIYFPPKDGFTFQDLVEATKRFHESYVIGRGACGTVYKAVMKSGKTIAVKKLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGEVLHGSATNLEWPIRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLEQGGDLVTWVRTHIRSHNNVLTQGILDNRIDLEEQVTVNHMLTVLKIALLCTSMSPSERPSMREVVLMLIESNEREGNLTLTRTNHDLPSKDATH* 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1446 1114 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 13 1099 - -
Ahy12g1446 1114 Gene3D Transferase(Phosphotransferase) domain 1 893 1107 - -
Ahy12g1446 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 936 948 IPR008271 GO:0004672|GO:0006468
Ahy12g1446 1114 SUPERFAMILY L domain-like 410 507 - -
Ahy12g1446 1114 Gene3D Ribonuclease Inhibitor 294 417 IPR032675 -
Ahy12g1446 1114 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 13 1099 - -
Ahy12g1446 1114 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Ahy12g1446 1114 SMART serkin_6 815 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1446 1114 Gene3D Ribonuclease Inhibitor 33 151 IPR032675 -
Ahy12g1446 1114 SMART LRR_typ_2 153 176 IPR003591 -
Ahy12g1446 1114 SMART LRR_typ_2 249 273 IPR003591 -
Ahy12g1446 1114 SMART LRR_typ_2 369 392 IPR003591 -
Ahy12g1446 1114 SMART LRR_typ_2 105 129 IPR003591 -
Ahy12g1446 1114 SMART LRR_typ_2 537 561 IPR003591 -
Ahy12g1446 1114 SMART LRR_typ_2 393 417 IPR003591 -
Ahy12g1446 1114 SMART LRR_typ_2 585 609 IPR003591 -
Ahy12g1446 1114 SMART LRR_typ_2 297 321 IPR003591 -
Ahy12g1446 1114 SMART LRR_typ_2 658 681 IPR003591 -
Ahy12g1446 1114 Gene3D Ribonuclease Inhibitor 224 293 IPR032675 -
Ahy12g1446 1114 Gene3D Ribonuclease Inhibitor 152 223 IPR032675 -
Ahy12g1446 1114 Gene3D Phosphorylase Kinase; domain 1 781 892 - -
Ahy12g1446 1114 ProSiteProfiles Protein kinase domain profile. 815 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1446 1114 Pfam Protein kinase domain 816 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1446 1114 Pfam Leucine rich repeat 83 142 IPR001611 GO:0005515
Ahy12g1446 1114 Pfam Leucine rich repeat 563 621 IPR001611 GO:0005515
Ahy12g1446 1114 SUPERFAMILY Protein kinase-like (PK-like) 793 1088 IPR011009 -
Ahy12g1446 1114 Pfam Leucine Rich Repeat 155 177 IPR001611 GO:0005515
Ahy12g1446 1114 Pfam Leucine Rich Repeat 661 682 IPR001611 GO:0005515
Ahy12g1446 1114 SUPERFAMILY RNI-like 85 407 - -
Ahy12g1446 1114 SUPERFAMILY L domain-like 475 725 - -
Ahy12g1446 1114 Gene3D Ribonuclease Inhibitor 418 732 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1446 Ahy-Chr12 70281965 70287761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1446 31 1090 Receptor kinase-like Gene Family AT5G56040 36.955 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy12g1446 Pkinase 3.20E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1446 - - gmx:100805792 1679.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1446 12 70281965 70287761 Ahy2g1214 2 54366586 54368365 hybridization