Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1406 ATGCTGCAATTGTTGGTGCTCTGTGCAGGGATTGTAGCAAACAAGTGTACTTGGGTGGATTTGACAGCACATGCTGCAGCTAGGGCATATGATCGAGCTGCGATCAAGTTCCGTAGCATTGATGCAGATATCAATTTCAACGTCAGCGATTATGATGAAGATATAAAGCAGATGAGTAACTTTAAAAAAATTGAAATGCAGAGAAAAGCAGCATTGCCGTTGAGGGACACAAAAAGCGGCAATGCGAACAAGATGAAGGCTCTGTGCGGCAAGGAAGCTTTGTTGCTAGGTGCCAGTCTTATTCAGATTCAGATGAAGCTGTGGACACTACCACTGAAGAATCAAATGTCAAATGATATTGGCATCGTTGCTGATAATGTCCAAGATTTTGGTGATGCGACGACCTTCCCTGCTGCTCCTGAAGTTGATACCATATGTGTTTTTTCGAAAAATAGTGCAAGATGTAATAGTAATTCTGCTCATGGGGCTATGGATTCATGGTCAAATACAACACCTATCTAA 522 0.4215 MLQLLVLCAGIVANKCTWVDLTAHAAARAYDRAAIKFRSIDADINFNVSDYDEDIKQMSNFKKIEMQRKAALPLRDTKSGNANKMKALCGKEALLLGASLIQIQMKLWTLPLKNQMSNDIGIVADNVQDFGDATTFPAAPEVDTICVFSKNSARCNSNSAHGAMDSWSNTTPI* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1406 173 SMART rav1_2 10 53 IPR001471 GO:0003700|GO:0006355
Ahy12g1406 173 Gene3D AP2/ERF domain 20 49 IPR036955 GO:0003700|GO:0006355
Ahy12g1406 173 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 65 - -
Ahy12g1406 173 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 22 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1406 Ahy-Chr12 66058201 66061169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1406 22 66 AP2-EREBP Transcription Factor Family AT2G39250 62.222 1.93e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1406 K09284 - aip:107625266 340.502