Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1405 ATGAACACGGACATGGACATACCCCTTCCTGAAGAGCTTGAACTTCTCGAGCTCGAAAGGGACTACCCAGATTTTGACATCCCCGAACCCGAACAGGAACAGGAATTGCAACCGCAAAAGCAACCGCAAACGCACCCGCAACCAGAATCGCCAGATCTGGTGGTTCTTCCAGAACCCCAATCCAATGGCCACAAGCGGTCGCGCTCCGACGATCCTTCTCCAGTCAGGTCGCTTTCCGAGGAGAAGCGGGTTAGGGTTGGCGATTCTGCTGCCTCTGAGGTTGATGCAGTTTCCAATGACGATGAGGACTGGCTTCAATACTCACCTCCTCCTAGAGGCGTTCGAATGGAAGAAGAAGTTAGGTTTGTGAAGGAGAAGGAGCTGTCAAGGTACGCTTGGGAGATCCACGGGGAGTGTATGCCGGTTACTGCGCCTAGCGGCGATAGAGTTTACGCAAAACTGAACCGCATTGAAGGGATGGAACTCGCAAGGAAGTTGGACTGGAGAGCCAGTTCTGCTGATCTAACTTTAGAACCTATTAATGCACTCTTCGAAAGATTGGAGCAAGAGGCTATCGCTAAGACCATGGAAGCTAGTTTGGAGGGCCAAAACTATCTAGATGTTCCTGCAACACAAATGGTGCATGAGCAACTTTGGGTAGATAAATATGCACCAAAGTCATTTACTGAGCTTCTTAGTGATGAACAAACAAATCGCGAGGTACTCTTATGGTTGAAACAATGGGACTCTGTGGTTTTTGGATCTGAAATTCGAAGTACATCAGATGATGTTTTGTTTGCTTTGAAGCGACATTCTTCTGTTGCCCAAAATCAGCGACCTTTCAATTCAAAGTTTTCAAGGACAAACAGAGGAGCCAAATGGAGTAGTGGGAGGTATAAAAATTCAAGAAGTATGGATGAGAGTAGTAATTCACAGGGCATTGAGGATATACTGAATACAAGGACAACCAATGTTGGTCCACCAGAACAGAAGATTCTTCTGCTCTGTGGATCACCTGGTCTTGGAAAAACAACAATTGCCCATGTAGCTGCCAGGCACTGTGGATATCATGTGGTGGAGGTTAATGCTAGTGATGATCGTTCTACATCAACTATTGAATCCAAAATCCTTGATGTTGTTCAAATGAACTCTGTCTTGTCTGATTCAAGGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGAGCCCTTGGTGAAGGCAAGGGTGCTGTGGAGGTTCTTTTGAAGATGGTTTCTGCTGAAACAAAGTCTGATGCTGGAAGGAAATCGTCAAAGAAGGGGTGGAAAACAGCAACATTATCAAGACCTGTGATTTGCATTTGTAATGATTTATATGCACCTGCCTTAAGACCGTTACGTCAGATAGCCAAGGTTCATATGTTTGTTCAGCCAACAGTTGGTCGTGTGGTAAGCAGGCTTAAATATATATGTAACAAGGAGGGAATGAAAGCTAGCGCTATTGCGCTCACTGCTCTAGCAAATTACACAGAATGTGATATACGCTCATGCTTGAATACTCTGCAATTTCTCTCCAAGAAAAAGGAAACCCTCAATATGTTTGATTTAGCTTCTCAAGTAGTTGGCCAGAAGGACGTGTCAAAGAATGTTATAGACATCTGGAAGGAGATTTTCCATAGGAAAAGAAAGAAGTTGGAAAGAAATTCACCTAAAAGCAAGTCTTTTGAATTTGATTCCTTGTACTCCCTGATATCAAACCGAGGTGATAGTGACTTGATTTCGGATGGAATTCATGAAAATATTTTGCGTCTCAATTATCATGATCCCGTGATGCAAAAAACTGTCAAGTGCTTCAATATTCTTGGAGTTTTTGATCTATTGCATAAATTCATATGGCGTACACAACAAATGCCCCTTCATGTATATTTGCCGCCCATAGCAATTGGTGTACATCATATAGTAGCTCAAGTTCAGAAGCCAAGCATTGAGTGGCCAAAGTCTTATCAAAGGTATCGAACAATGATGTCTGAGAAGATTGACATTTTGAATACTTGGCATTACAAAGTCCCACCACATATTGCAAGGCACCTATCAGTTAGTTGCATTGTTGAAGATATAATTTCTCCATTGTTGCATATTCTGTCTCCACCAACGATAAGACCGGTGGCATTACATCTCCTAGCTGAAAAGGAGAAGAACGATTTTTCTCAGCTAGTTAGTACAATGGTCTCTTACTCTATAACATACAAGACTACAAAGTCAGAAATGCTGCCTAATCACCTAAGGCATGAAGTAGCAAATGACATGGCTGTGTCTCTTGTTCCCCCAATCAATGACTTCATAAACTTTAAGGAATATGCCTCCAATCATCACACCCTTTCATTACCTATGAAGAAGGTTTTGCTCCATGAAGTTGAAAAACAGAGAATCTTGCAAGTTACAAAGGGAGATGAAGTTTTTGCTAGTGGAACTATCAATGCTCAATCAACCAAAGCCAACCATGGAGCTGCAGCTGATAAGAAAACCACTGAAACAAATACTAACATTTTAGCGAGGCAGTTAAATGCAAATCCCAAATCAGATTCACCAAACTTGAATCTTAATAAAGTTCCATGTGTTTTAGACAACGCAAAACTGCCAAACACGGGAAACAAGAAAAGGCCATCTAATGGGTTTTCAAGTTTCTTTGACAGGTTTAAAAAGCCAGGTGAGAAAGGCCTCAAAAGCAATGATGGCTCTCTGCAGAAAGAAGAAACTTTGAAGAAAGACCCATTCCCTTTACTATTCAAGTTTAATGAGGGCTTTACGAATGCGGTGAAAAGACCTGTCCGGATACGTGAATTTCTATGTTGA 2829 0.4221 MNTDMDIPLPEELELLELERDYPDFDIPEPEQEQELQPQKQPQTHPQPESPDLVVLPEPQSNGHKRSRSDDPSPVRSLSEEKRVRVGDSAASEVDAVSNDDEDWLQYSPPPRGVRMEEEVRFVKEKELSRYAWEIHGECMPVTAPSGDRVYAKLNRIEGMELARKLDWRASSADLTLEPINALFERLEQEAIAKTMEASLEGQNYLDVPATQMVHEQLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSVVFGSEIRSTSDDVLFALKRHSSVAQNQRPFNSKFSRTNRGAKWSSGRYKNSRSMDESSNSQGIEDILNTRTTNVGPPEQKILLLCGSPGLGKTTIAHVAARHCGYHVVEVNASDDRSTSTIESKILDVVQMNSVLSDSRPKCLVVDEIDGALGEGKGAVEVLLKMVSAETKSDAGRKSSKKGWKTATLSRPVICICNDLYAPALRPLRQIAKVHMFVQPTVGRVVSRLKYICNKEGMKASAIALTALANYTECDIRSCLNTLQFLSKKKETLNMFDLASQVVGQKDVSKNVIDIWKEIFHRKRKKLERNSPKSKSFEFDSLYSLISNRGDSDLISDGIHENILRLNYHDPVMQKTVKCFNILGVFDLLHKFIWRTQQMPLHVYLPPIAIGVHHIVAQVQKPSIEWPKSYQRYRTMMSEKIDILNTWHYKVPPHIARHLSVSCIVEDIISPLLHILSPPTIRPVALHLLAEKEKNDFSQLVSTMVSYSITYKTTKSEMLPNHLRHEVANDMAVSLVPPINDFINFKEYASNHHTLSLPMKKVLLHEVEKQRILQVTKGDEVFASGTINAQSTKANHGAAADKKTTETNTNILARQLNANPKSDSPNLNLNKVPCVLDNAKLPNTGNKKRPSNGFSSFFDRFKKPGEKGLKSNDGSLQKEETLKKDPFPLLFKFNEGFTNAVKRPVRIREFLC* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1405 942 CDD AAA 328 460 - -
Ahy12g1405 942 Pfam ATPase family associated with various cellular activities (AAA) 333 449 IPR003959 GO:0005524|GO:0016887
Ahy12g1405 942 Gene3D - 470 540 - -
Ahy12g1405 942 MobiDBLite consensus disorder prediction 17 110 - -
Ahy12g1405 942 CDD HLD_clamp_RFC 470 525 - -
Ahy12g1405 942 Gene3D - 216 469 IPR027417 -
Ahy12g1405 942 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 4 941 - -
Ahy12g1405 942 SMART AAA_5 329 473 IPR003593 -
Ahy12g1405 942 MobiDBLite consensus disorder prediction 63 89 - -
Ahy12g1405 942 MobiDBLite consensus disorder prediction 282 313 - -
Ahy12g1405 942 MobiDBLite consensus disorder prediction 34 48 - -
Ahy12g1405 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 527 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1405 Ahy-Chr12 66026013 66047346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1405 330 517 Core DNA Replication Machinery Family AT5G22010 30.542 2.57e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1405 K11269 - gmx:100785041 1268.83